Structure of PDB 6wf6 Chain A Binding Site BS01
Receptor Information
>6wf6 Chain A (length=141) Species:
100226
(Streptomyces coelicolor A3(2)) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SLTRIDHIGIACHDLDATVEFYRATYGFEVFHTEVNEEQGVREAMLKIND
TSDGGASYLQLLEPTREDSAVGKWLAKNGEGVHHIAFGTADVDADAADIR
DKGVRVLYDEPRRGSMGSRITFLHPKDCHGVLTELVTSAAV
Ligand information
Ligand ID
CO
InChI
InChI=1S/Co/q+2
InChIKey
XLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Co+2]
CACTVS 3.341
[Co++]
Formula
Co
Name
COBALT (II) ION
ChEMBL
DrugBank
DB14205
ZINC
PDB chain
6wf6 Chain A Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6wf6
Substrate Enolate Intermediate and Mimic Captured in the Active Site of Streptomyces coelicolor Methylmalonyl-CoA Epimerase.
Resolution
1.39 Å
Binding residue
(original residue number in PDB)
H7 Q60 H84 E134
Binding residue
(residue number reindexed from 1)
H7 Q60 H84 E134
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
H7 E43 Q60 H84 E134
Catalytic site (residue number reindexed from 1)
H7 E43 Q60 H84 E134
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004493
methylmalonyl-CoA epimerase activity
GO:0046872
metal ion binding
Biological Process
GO:0046491
L-methylmalonyl-CoA metabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6wf6
,
PDBe:6wf6
,
PDBj:6wf6
PDBsum
6wf6
PubMed
34856049
UniProt
Q9L2C2
[
Back to BioLiP
]