Structure of PDB 6we9 Chain A Binding Site BS01
Receptor Information
>6we9 Chain A (length=164) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GTSKLKYVLQDARFFLIKSNNHENVSLAKAKGVWSTLPVNEKKLNLAFRS
ARSVILIFSVRESGKFQGFARLSSESHHGGSPIHWVLPAGMSAKMLGGVF
KIDWICRRELPFTKSAHLTNPWNEHKPVKIGRDGQEIELECGTQLCLLFP
PDESIDLYQVIHKM
Ligand information
>6we9 Chain B (length=11) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cgcggactctg
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6we9
Biochemical and structural basis for YTH domain of human YTHDC1 binding to methylated adenine in DNA.
Resolution
1.59 Å
Binding residue
(original residue number in PDB)
K361 S362 N363 N367 W377 S378 L380 P381 R404 E405 W428 M438 K472 I473 G474 R475 D476
Binding residue
(residue number reindexed from 1)
K18 S19 N20 N24 W34 S35 L37 P38 R61 E62 W85 M95 K129 I130 G131 R132 D133
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
View graph for
Molecular Function
External links
PDB
RCSB:6we9
,
PDBe:6we9
,
PDBj:6we9
PDBsum
6we9
PubMed
32663306
UniProt
Q96MU7
|YTDC1_HUMAN YTH domain-containing protein 1 (Gene Name=YTHDC1)
[
Back to BioLiP
]