Structure of PDB 6wce Chain A Binding Site BS01
Receptor Information
>6wce Chain A (length=314) Species:
715
(Actinobacillus pleuropneumoniae) [
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EGRLTVYCTVQNEVCENLTQKFAKQYQVETQFIQGGTGTIFGKIKAEKDN
PQADIWVGGTIEPHFQAGELGLLESYRSPKQAEILPQFKSLMEKRGDKTS
IIYMLVLGFGVNSEKLQKLGVKAPQSWDDLLNPAFKGEIQLPDPRSSGTT
YTIMATLIQKLGEEKAFEYLKKLNENVSQYVKSNLVTANLSRGESSASIG
FVHAYATEKEKGAPVETVIPAGKVGYALGGASIIKNARNLENAKLFMDYV
LSAETQELPWREHGVYQIPTNANAKASPSSVDPKKLDLLDFDFDKFGSSE
EGKRLIDKWLTEIK
Ligand information
Ligand ID
PLP
InChI
InChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKey
NGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0
Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04
O=P(O)(O)OCc1cnc(c(O)c1C=O)C
Formula
C8 H10 N O6 P
Name
PYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBL
CHEMBL82202
DrugBank
DB00114
ZINC
ZINC000001532514
PDB chain
6wce Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6wce
Actinobacillus utilizes a binding protein-dependent ABC transporter to acquire the active form of vitamin B 6 .
Resolution
1.754 Å
Binding residue
(original residue number in PDB)
T37 Y103 L105 S147 G148 T149 S183 H203
Binding residue
(residue number reindexed from 1)
T37 Y103 L105 S147 G148 T149 S183 H203
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6wce
,
PDBe:6wce
,
PDBj:6wce
PDBsum
6wce
PubMed
34358566
UniProt
B0BUC2
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