Structure of PDB 6w62 Chain A Binding Site BS01

Receptor Information
>6w62 Chain A (length=910) Species: 1410628 (Lachnospiraceae bacterium ND2006) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NASETRKAYTTKMIPRSHDRMKLLGNFMDYLMDGTPIFFELWNQFGGGID
RDIISGTANKDKISDDLLLAVNWFKVMPINSKPQGVSPSNLANLFQQYSG
SEPDIQAQEYFASNFDTEKHQWKDMRVEYERLLAELQLSRSDMHHDLKLM
YKEKCIGLSLSTAHYITSVMSYSAMLENALSPIKGMTTKNCKFVLKQIDA
KNDIKYENEPFGKIVEGFFDSVKWVLHPHHIGESNIKTLWEDLNAIHSKY
EEDIASLSEDKKEKRIKVYQGDVCQTINTYCEEVGKEAKTPLVQLLRYLY
SRKDDIAVDKIIDGITFLSKKHKVEKQKINPVIQKYPSFNFGNNSKLLGK
IISPKDKLKHNLKCNRNQVDNYIWIEIKVLNTKTMRWEKHHYALSSTRFL
EEVYYPATSEGLRKVKKRQMRLEAARQQNLLPRYTWGKDFNINICKRGNN
FEVTLATKVKKKKEKNYKVVLGYDANIVRKNTYAAIEAHANGDGVIDYND
LPVKPIESGFVTVESQVRDKSYDQLSYNGVKLLYCKPHVESRRSFLEKYR
NGTMKDNRGNNIQIDFMKDFEAIADDETSLYYFNMKYCKLLQSSIRNHSS
QAKEYREEIFELLRDGKLSVLKLSSLSNLSFVMFKVAKSLIGTYFGHLLK
APPITDEDKQKADPEMFALRLALEEKRLNKVKSKKEVIANKIVAKALELR
DKYGPVLIKGENISDTTKKGKKSSTNSFLMDWLARGVANKVKEMVMMHQG
LEFVEVNPNFTSHQDPFVHKNPENTFRARYSRCTPSELTEKNRKEILSFL
SDKPSKRPTNAYYNEGAMAFLATYGLKKNDVLGVSLEKFKQIMANILHQR
SEDQLLFPSRGGMFYLATYKLDADATSVNWNGKQFWVCNADLVAAYNVGL
VDIQKDFKKK
Ligand information
>6w62 Chain B (length=24) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gugcccaucguuggcacgcgugca
<<<<<.......>>>>>.......
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6w62 Mechanisms for target recognition and cleavage by the Cas12i RNA-guided endonuclease.
Resolution3.9 Å
Binding residue
(original residue number in PDB)		T11 R12 K13 T16 K318 S532 S533 T534 R535 K590 R594 Q689 R691 D692 Y695 Q697 V703 Y707 L791 L796 S797 K859 N862 K865 S866 E869 N873 M913 R918 M927 M930
Binding residue
(residue number reindexed from 1)		T5 R6 K7 T10 K189 S395 S396 T397 R398 K417 R421 Q516 R518 D519 Y522 Q524 V530 Y534 L618 L623 S624 K676 N679 K682 S683 E686 N690 M730 R735 M744 M747
External links