Structure of PDB 6vw4 Chain A Binding Site BS01

Receptor Information
>6vw4 Chain A (length=135) Species: 479433 (Catenulispora acidiphila DSM 44928) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
QAALYAEVQQHQARQMHALDEGKFEEYADTFTPDGVFRHTPGRDPAIGRE
AIVRELNEFHERYAPVQRRHMFTMLAIDEDSAVQADFYTLVLTTRVDGLT
VGPSCPVRDVLVRGADGRLLTASRWVEHDNRTVAE
Ligand information
Ligand IDSDN
InChIInChI=1S/C16H14O5/c1-8-14-10(6-11(21-8)7-13(18)19)5-9-3-2-4-12(17)15(9)16(14)20/h2-5,11,17H,6-7H2,1H3,(H,18,19)/t11-/m0/s1
InChIKeyHHXSOTFPYPQSBU-NSHDSACASA-N
SMILES
SoftwareSMILES
CACTVS 3.341CC1=C2C(=Cc3cccc(O)c3C2=O)C[C@@H](CC(O)=O)O1
ACDLabs 10.04O=C2c1c(O)cccc1C=C3C2=C(OC(C3)CC(=O)O)C
OpenEye OEToolkits 1.5.0CC1=C2C(=Cc3cccc(c3C2=O)O)CC(O1)CC(=O)O
OpenEye OEToolkits 1.5.0CC1=C2C(=Cc3cccc(c3C2=O)O)C[C@H](O1)CC(=O)O
CACTVS 3.341CC1=C2C(=Cc3cccc(O)c3C2=O)C[CH](CC(O)=O)O1
FormulaC16 H14 O5
Name[(3S)-9-hydroxy-1-methyl-10-oxo-4,10-dihydro-3H-benzo[g]isochromen-3-yl]acetic acid;
4,10-dihydro-9-hydroxy-1-methyl-10-oxo-3-H-naphtho-[2,3-c]-pyran-3-(S)-acetic acid
ChEMBL
DrugBankDB08541
ZINCZINC000024960091
PDB chain6vw4 Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6vw4 Structural characterization of three noncanonical NTF2-like superfamily proteins: implications for polyketide biosynthesis.
Resolution2.35 Å
Binding residue
(original residue number in PDB)
M22 Y33 F43 F65 R76 F80 T102 R137 H141
Binding residue
(residue number reindexed from 1)
M16 Y27 F37 F59 R68 F72 T89 R124 H128
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0051213 dioxygenase activity

View graph for
Molecular Function
External links
PDB RCSB:6vw4, PDBe:6vw4, PDBj:6vw4
PDBsum6vw4
PubMed32744249
UniProtC7PWR4

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