Structure of PDB 6vl7 Chain A Binding Site BS01

Receptor Information
>6vl7 Chain A (length=777) Species: 1365250 (Pseudoalteromonas luteoviolacea DSM 6061) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
CQYKIYPPLGIARVGNGPAIKPLSLSTPEVPWAHLYDTNVQYLVTQQELE
QLLEEAFGGNVINEISQIKTKLDERKFKQEEIETITGLLGLSHLVPQQQL
SRSLDNLVQQIKGALLKVLSDHYLHAVKKQAQNFYIYKCDNPVEKLKLTD
GDKVTWRVEVANKKSFWYDYNNALDLSLHTQGSGNLSKNVSKHRLAPAMT
AKRRNPNVITNSLRKQLVISSQGSVSSDNNTQVPLRGKFPANERHNVLQG
SIECDNEGVLRFYAGNGISQALSPSSLNTDFADNSNWFDDICDGRVTAVV
ELKNGDTFEIQDEQSSAWVATTPPDYAPQIEPIVTMYDMVSGAALKEQDL
DNLTTQFSDVFPILYRLYRMQWVNQADFTDNAVNTQIRELNSELGFAQLL
DNSASAKSLREGIFNQFRNPLFDQDIDVDDPNEWVSNSRIIPSKDETNIA
AKPATSSLKLPFYPNDGIDYPGSPVQWFAIPPFMYQHLQNWAAGDFSVTQ
VEKESANTIEELGLFYSEQFKNSPNSALLCARGALDALYGGGFCPGVELT
WPMRHNLIYSQNDYVSSVTPEINLLGLREFRLKQDLQGLNSPNMYQDFGH
VIAVDNVTASIDPNSDAAWLWRSTPGDLTKWMGIPWQSDAASCQAVYTPE
DFPIPSWWAANLPVHVLPLARYNKFKDSQSADLPEINGMTHSIAQGMSEE
TFEHLRLEQFSQRLDWLHTADLGFVGYHAEGGYTNGLIQMVSQWKNMAMV
MARPVENPGSSGIPNVVYVAYSQADKD
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6vl7 Chain A Residue 901 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6vl7 Roles of active-site residues in catalysis, substrate binding, cooperativity, and the reaction mechanism of the quinoprotein glycine oxidase.
Resolution2.14 Å
Binding residue
(original residue number in PDB)		D360 A362 I365 A699 N700
Binding residue
(residue number reindexed from 1)		D325 A327 I330 A660 N661
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6vl7, PDBe:6vl7, PDBj:6vl7
PDBsum6vl7
PubMed32234764
UniProtA0A161XU12

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