Structure of PDB 6vge Chain A Binding Site BS01
Receptor Information
>6vge Chain A (length=98) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MPGSGQIQLWQFLLELLSDSSNSSCITWEGTNGEFKMTDPDEVARRWGER
KSKPNMNYDKLSRALRYYYDKNIMTKVHGKRYAYKFDFHGIAQALQPH
Ligand information
>6vge Chain B (length=16) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
cagaggatgtggcttc
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6vge
Allosteric interference in oncogenic FLI1 and ERG transactions by mithramycins.
Resolution
4.25 Å
Binding residue
(original residue number in PDB)
R367 R370 Y371 Y373 K380 K384 Y386
Binding residue
(residue number reindexed from 1)
R63 R66 Y67 Y69 K76 K80 Y82
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
GO:0006357
regulation of transcription by RNA polymerase II
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6vge
,
PDBe:6vge
,
PDBj:6vge
PDBsum
6vge
PubMed
33275876
UniProt
P11308
|ERG_HUMAN Transcriptional regulator ERG (Gene Name=ERG)
[
Back to BioLiP
]