Structure of PDB 6v14 Chain A Binding Site BS01
Receptor Information
>6v14 Chain A (length=102) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
STPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMK
DKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMM
SK
Ligand information
Ligand ID
QMG
InChI
InChI=1S/C20H19N3O2/c1-12-4-5-14(20(25)22-15-6-7-15)10-16(12)17-11-18(13(2)24)23-9-3-8-21-19(17)23/h3-5,8-11,15H,6-7H2,1-2H3,(H,22,25)
InChIKey
RPBMXJHQYJLPDN-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
Cc1ccc(cc1c2cc(n3c2nccc3)C(=O)C)C(=O)NC4CC4
ACDLabs 12.01
C1C(C1)NC(c4ccc(C)c(c2cc(C(C)=O)n3c2nccc3)c4)=O
CACTVS 3.385
CC(=O)c1cc(c2ncccn12)c3cc(ccc3C)C(=O)NC4CC4
Formula
C20 H19 N3 O2
Name
3-(6-acetylpyrrolo[1,2-a]pyrimidin-8-yl)-N-cyclopropyl-4-methylbenzamide
ChEMBL
CHEMBL4065619
DrugBank
ZINC
ZINC000585672941
PDB chain
6v14 Chain A Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6v14
Structural Basis of Inhibitor Selectivity in the BRD7/9 Subfamily of Bromodomains.
Resolution
1.7 Å
Binding residue
(original residue number in PDB)
F160 F163 V165 I169 N216 Y222
Binding residue
(residue number reindexed from 1)
F23 F26 V28 I32 N79 Y85
Annotation score
1
Binding affinity
MOAD
: Kd=82nM
BindingDB: Kd=33nM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6v14
,
PDBe:6v14
,
PDBj:6v14
PDBsum
6v14
PubMed
32091206
UniProt
Q9H8M2
|BRD9_HUMAN Bromodomain-containing protein 9 (Gene Name=BRD9)
[
Back to BioLiP
]