Structure of PDB 6v0v Chain A Binding Site BS01

Receptor Information
>6v0v Chain A (length=541) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GLQPAVCLAIRVNTFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKVL
LPGYHPFEWQPPLKNVSSRTDVGIIDGLSGLASSVDEYPVDTIAKRFRYD
SALVSALMDMEEDILEGMRSQDLDDYLNGPFTVVVKESCDGMGDVSEKPE
KAVRFSFTVMRITIEHGSQNVKVFEEPKPNSELCCKPLCLMLADESDHET
LTAILSPLIAEREAMKSSELTLEMGGIPRTFKFIFRGTGYDEKLVREVEG
LEASGSVYICTLCDTTRLEASQNLVFHSITRSHAENLQRYEVWRSNPYHE
SVEELRDRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKIFQLEIGEVYK
HPNASKEERKRWQATLDKHLRKRMNLKPIMRMNGNFARKLMTQETVDAVC
ELIPSEERHEALRELMDLYLKMKPVWRSSCPAKECPESLCQYSFNSQRFA
ELLSTKFKYRYEGKITNYFHKTLAHVPEIIERDGSIGAWASEGNESGNKL
FRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6v0v Cutting antiparallel DNA strands in a single active site.
Resolution3.61 Å
Binding residue
(original residue number in PDB)		A720 G722 S723 V724 K844 I846 M847 R848
Binding residue
(residue number reindexed from 1)		A253 G255 S256 V257 K377 I379 M380 R381
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
3.1.-.-
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0043565 sequence-specific DNA binding
GO:0046872 metal ion binding
GO:0061630 ubiquitin protein ligase activity
Biological Process
GO:0033151 V(D)J recombination

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Molecular Function
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Biological Process
External links
PDB RCSB:6v0v, PDBe:6v0v, PDBj:6v0v
PDBsum6v0v
PubMed32015552
UniProtP15919|RAG1_MOUSE V(D)J recombination-activating protein 1 (Gene Name=Rag1)

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