Structure of PDB 6ujs Chain A Binding Site BS01

Receptor Information
>6ujs Chain A (length=1182) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KPAVSVLTMFRYAGWLDRLYMLVGTLAAIIHGVALPLMMLIFGDMTDSFA
SVGQVSKQSTQMSEADKRAMFAKLEEEMTTYAYYYTGIGAGVLIVAYIQV
SFWCLAAGRQIHKIRQKFFHAIMNQEIGWFDVHDVGELNTRLTDDVSKIN
EGIGDKIGMFFQAMATFFGGFIIGFTRGWKLTLVILAISPVLGLSAGIWA
KILSSFTDKELHAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNNNLEE
AKRLGIKKAITANISMGAAFLLIYASYALAFWYGTSLVISKEYSIGQVLT
VFFSVLIGAFSVGQASPNIEAFANARGAAYEVFKIIDNKPSIDSFSKSGH
KPDNIQGNLEFKNIHFSYPSRKEVQILKGLNLKVKSGQTVALVGNSGCGK
STTVQLMQRLYDPLDGMVSIDGQDIRTINVRYLREIIGVVSQEPVLFATT
IAENIRYGREDVTMDEIEKAVKEANAYDFIMKLPHQFDTLVGERGAQLSG
GQKQRIAIARALVRNPKILLLDEATSALDTESEAVVQAALDKAREGRTTI
VIAHRLSTVRNADVIAGFDGGVIVEQGNHDELMREKGIYFKLVMTQTPPA
SFWRILKLNSTEWPYFVVGIFCAIINGGLQPAFSVIASKVVGVFTNGGPP
ETQRQNSNLFSLLFLILGIISFITFFLQGFTFGKAGEILTKRLRYMVFKS
MLRQDVSWFDDPKNTTGALTTRLANDAAQVKGATGSRLAVIFQNIANLGT
GIIISLIYGWQLTLLLLAIVPIIAIAGVVEMKMLSGQALKDKKELEGSGK
IATEAIENFRTVVSLTREQKFETMYAQSLQIPYRNAMKKAHVFGITFSFT
QAMMYFSYAAAFRFGAYLVTQQLMTFENVLLVFSAIVFGAMAVGQVSSFA
PDYAKATVSASHIIRIIEKTPEIDSYSTQGLKPNMLEGNVQFSGVVFNYP
TRPSIPVLQGLSLEVKKGQTLALVGSSGCGKSTVVQLLERFYDPMAGSVF
LDGKEIKQLNVQWLRAQLGIVSQEPILFDCSIAENIAYGDNSRVVSYEEI
VRAAKEANIHQFIDSLPDKYNTRVGDKGTQLSGGQKQRIAIARALVRQPH
ILLLDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVV
IQNGKVKEHGTHQQLLAQKGIYFSMVSVQAGA
Ligand information
Ligand ID4C8
InChIInChI=1S/C12H5Br5O/c13-6-1-2-11(8(15)3-6)18-12-9(16)4-7(14)5-10(12)17/h1-5H
InChIKeyNSKIRYMHNFTRLR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385Brc1ccc(Oc2c(Br)cc(Br)cc2Br)c(Br)c1
OpenEye OEToolkits 1.9.2c1cc(c(cc1Br)Br)Oc2c(cc(cc2Br)Br)Br
ACDLabs 12.011,3,5-tribromo-2-(2,4-dibromophenoxy)benzene
FormulaC12 H5 Br5 O
Name2,4-dibromophenyl 2,4,6-tribromophenyl ether
ChEMBL
DrugBank
ZINCZINC000095619687
PDB chain6ujs Chain A Residue 1301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ujs Structural definition of polyspecific compensatory ligand recognition by P-glycoprotein.
Resolution4.17 Å
Binding residue
(original residue number in PDB)		F310 A728 F979
Binding residue
(residue number reindexed from 1)		F281 A637 F888
Annotation score1
Enzymatic activity
Enzyme Commision number 7.6.2.1: P-type phospholipid transporter.
7.6.2.2: ABC-type xenobiotic transporter.
Gene Ontology
Molecular Function
GO:0005524 ATP binding
GO:0008559 ABC-type xenobiotic transporter activity
GO:0015562 efflux transmembrane transporter activity
GO:0016887 ATP hydrolysis activity
GO:0022857 transmembrane transporter activity
GO:0042626 ATPase-coupled transmembrane transporter activity
GO:0042910 xenobiotic transmembrane transporter activity
GO:0090554 phosphatidylcholine floppase activity
GO:0090555 phosphatidylethanolamine flippase activity
GO:0099038 ceramide floppase activity
GO:0140326 ATPase-coupled intramembrane lipid transporter activity
GO:0140328 floppase activity
GO:0140359 ABC-type transporter activity
Biological Process
GO:0001666 response to hypoxia
GO:0001890 placenta development
GO:0007565 female pregnancy
GO:0007595 lactation
GO:0007623 circadian rhythm
GO:0009410 response to xenobiotic stimulus
GO:0009914 hormone transport
GO:0010046 response to mycotoxin
GO:0014070 response to organic cyclic compound
GO:0031667 response to nutrient levels
GO:0032355 response to estradiol
GO:0032496 response to lipopolysaccharide
GO:0032570 response to progesterone
GO:0033189 response to vitamin A
GO:0033280 response to vitamin D
GO:0033762 response to glucagon
GO:0035633 maintenance of blood-brain barrier
GO:0036146 cellular response to mycotoxin
GO:0043215 daunorubicin transport
GO:0045332 phospholipid translocation
GO:0046686 response to cadmium ion
GO:0046865 terpenoid transport
GO:0050892 intestinal absorption
GO:0055085 transmembrane transport
GO:0060856 establishment of blood-brain barrier
GO:0071217 cellular response to external biotic stimulus
GO:0071222 cellular response to lipopolysaccharide
GO:0071236 cellular response to antibiotic
GO:0071312 cellular response to alkaloid
GO:0071356 cellular response to tumor necrosis factor
GO:0071392 cellular response to estradiol stimulus
GO:0071475 cellular hyperosmotic salinity response
GO:0071548 response to dexamethasone
GO:0071549 cellular response to dexamethasone stimulus
GO:0097068 response to thyroxine
GO:0097305 response to alcohol
GO:0097327 response to antineoplastic agent
GO:0099040 ceramide translocation
GO:0140115 export across plasma membrane
GO:1902065 response to L-glutamate
GO:1902396 protein localization to bicellular tight junction
GO:1903416 response to glycoside
GO:1904057 negative regulation of sensory perception of pain
GO:1904148 cellular response to nonylphenol
GO:1904446 positive regulation of establishment of Sertoli cell barrier
GO:1904478 regulation of intestinal absorption
GO:1905231 cellular response to borneol
GO:1905232 cellular response to L-glutamate
GO:1905233 response to codeine
GO:1905235 response to quercetin
GO:1905237 response to cyclosporin A
GO:1990961 xenobiotic detoxification by transmembrane export across the plasma membrane
GO:1990962 xenobiotic transport across blood-brain barrier
GO:1990963 establishment of blood-retinal barrier
GO:2001025 positive regulation of response to drug
Cellular Component
GO:0005737 cytoplasm
GO:0005886 plasma membrane
GO:0016020 membrane
GO:0016324 apical plasma membrane
GO:0031526 brush border membrane
GO:0045177 apical part of cell
GO:0046581 intercellular canaliculus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ujs, PDBe:6ujs, PDBj:6ujs
PDBsum6ujs
PubMed32695413
UniProtP21447|MDR1A_MOUSE ATP-dependent translocase ABCB1 (Gene Name=Abcb1a)

[Back to BioLiP]