Structure of PDB 6ug1 Chain A Binding Site BS01

Receptor Information
>6ug1 Chain A (length=477) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RNCSSNEERKRRKYFHMLYLVCLMVHGFIRNEWINSKRLSRKLSNLVPEK
VFELLHPQKDEELPLRSTRKLLDGLKKCMELWQKHWKITKKYDNEGLYMR
TWKEIEMSANNKRKFKTLKRSDFLRAVSKGHGDPDISVQGFVAMLRACNV
NARLIMSCQPPDFTNMKIDTSLNAYKDMVKYPIFWCEVWDKFSKKWITVD
PVNLKTIEQVRLHSKLAPKGVACCERNMLRYVIAYDRKYGCRDVTRRYAQ
WMNSKVRKRRITKDDFGEKWFRKVITALHHRKRTKIDDYEDQYFFRRDES
EGIPDSVQDLKNHPYYVLEQDIKQTQIVKPGCKECGYLKVHGKVGKVLKV
YAKRDIADLKSARQWYMNGRILKGSRCKKVIAERLYSFEDTELYIPPLAS
GEITKNTFGNIEVFAPTMIPGNCCLVENPVAIKAARFLGVEFAPAVTSFK
KPVLSGIVVAKWLREAIETAIDGIEFI
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6ug1 Impact of DNA sequences on DNA 'opening' by the Rad4/XPC nucleotide excision repair complex.
Resolution2.833 Å
Binding residue
(original residue number in PDB)		R129 N134 V352 S437 V438 Q439 Q495
Binding residue
(residue number reindexed from 1)		R1 N6 V221 S306 V307 Q308 Q364
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003684 damaged DNA binding
Biological Process
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0005634 nucleus

View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:6ug1, PDBe:6ug1, PDBj:6ug1
PDBsum6ug1
PubMed34428697
UniProtP14736|RAD4_YEAST DNA repair protein RAD4 (Gene Name=RAD4)

[Back to BioLiP]