Structure of PDB 6uex Chain A Binding Site BS01

Receptor Information
>6uex Chain A (length=247) Species: 158879 (Staphylococcus aureus subsp. aureus N315) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GKISILVLGADKAQGGQSRTDSIMVVQYDFINKKMKMMSVMRDIYADIPG
YGKHKINSAYALGGPELLRKTLDKNLGINPEYYAVVDFTGFEKMIDELMP
EGVPINVEKDMSKNIGVSLKKGNHRLNGKELLGYARFRHDPEGDFGRVRR
QQQVMQTLKKEMVNFRTVVKLPKVAGILRGYVNTNIPDSGIFQTGLSFGI
RGEKDVKSLTVPIKNSYEDVNTNTDGSALQINKNTNKQAIKDFLDED
Ligand information
Ligand IDQ5S
InChIInChI=1S/C48H81NO12P2/c1-35(2)18-11-19-36(3)20-12-21-37(4)22-13-23-38(5)24-14-25-39(6)26-15-27-40(7)28-16-29-41(8)30-17-31-42(9)32-33-58-62(54,55)61-63(56,57)60-48-45(49-43(10)51)47(53)46(52)44(34-50)59-48/h18,20,22,24,26,28,30,32,44-48,50,52-53H,11-17,19,21,23,25,27,29,31,33-34H2,1-10H3,(H,49,51)(H,54,55)(H,56,57)/b36-20-,37-22-,38-24-,39-26-,40-28-,41-30-,42-32-/t44-,45-,46-,47-,48-/m1/s1
InChIKeyUHEQUFGFBDQLSB-MUZKLJMZSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01C(/C=C(\CC[C@H]=C(C)C)C)CC(C)=[C@H]CCC(C)=[C@H]CCC(C)=[C@H]CCC(C)=[C@H]CCC(C)=[C@H]CCC(C)=[C@H]COP(O)(=O)OP(=O)(O)OC1C(C(C(C(O1)CO)O)O)NC(C)=O
OpenEye OEToolkits 2.0.7CC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCCC(=CCOP(=O)(O)OP(=O)(O)OC1C(C(C(C(O1)CO)O)O)NC(=O)C)C)C)C)C)C)C)C)C
OpenEye OEToolkits 2.0.7CC(=CCC/C(=C\CC/C(=C\CC/C(=C\CC/C(=C\CC/C(=C\CC/C(=C\CC/C(=C\COP(=O)(O)OP(=O)(O)O[C@@H]1[C@@H]([C@H]([C@@H]([C@H](O1)CO)O)O)NC(=O)C)/C)/C)/C)/C)/C)/C)/C)C
CACTVS 3.385CC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCCC(C)=CCO[P](O)(=O)O[P](O)(=O)O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1NC(C)=O
CACTVS 3.385CC(C)=CCC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CC\C(C)=C/CO[P](O)(=O)O[P](O)(=O)O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1NC(C)=O
FormulaC48 H81 N O12 P2
Name2-(acetylamino)-2-deoxy-1-O-[(S)-hydroxy{[(S)-hydroxy{[(2Z,6Z,10Z,14Z,18Z,22Z,26Z)-3,7,11,15,19,23,27,31-octamethyldotriaconta-2,6,10,14,18,22,26,30-octaen-1-yl]oxy}phosphoryl]oxy}phosphoryl]-alpha-D-glucopyranose
ChEMBL
DrugBank
ZINC
PDB chain6uex Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6uex Crystallographic analysis ofStaphylococcus aureusLcpA, the primary wall teichoic acid ligase.
Resolution1.9 Å
Binding residue
(original residue number in PDB)
G89 R99 D101 V106 M115 R122 V166 F168 M174 N194 L212 R216 R218 R227 M235 K239
Binding residue
(residue number reindexed from 1)
G9 R19 D21 V26 M35 R42 V86 F88 M94 N114 L132 R136 R138 R147 M155 K159
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:6uex, PDBe:6uex, PDBj:6uex
PDBsum6uex
PubMed31969390
UniProtQ99Q02|MSRR_STAAN Regulatory protein MsrR (Gene Name=msrR)

[Back to BioLiP]