Structure of PDB 6ucz Chain A Binding Site BS01

Receptor Information
>6ucz Chain A (length=254) Species: 948 (Anaplasma phagocytophilum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VTTKIVGILNVTEANAAIRHATDLIEHGADVIDVGAESTAPGVSPITQEE
EWSRLKEVLPEIIRIAHNAHVEVSIDTRNAKTAELALKLGVDYINDQGGL
LDPDMPAIAAASSAKIIIMHHFGLPVSQDRSYVGQPEQLLNEIIEWLCSR
VDTLIAQGVVRERIILDPGLGFGKLPEYSWYIAKNIGKLKKLGFPVCVGH
SRKSMFSLIPVELSERDVPTAMLSTFLAQQQVDFLRVHDVKLTGISIKIA
NLLV
Ligand information
Ligand IDPMM
InChIInChI=1S/C7H8N5O5P/c8-7-11-5-4(6(13)12-7)10-3(1-9-5)2-17-18(14,15)16/h1H,2H2,(H2,14,15,16)(H3,8,9,11,12,13)
InChIKeyAJXFJEHKGGCFNM-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341NC1=Nc2ncc(CO[P](O)(O)=O)nc2C(=O)N1
OpenEye OEToolkits 1.5.0c1c(nc2c(n1)N=C(NC2=O)N)COP(=O)(O)O
ACDLabs 10.04O=P(O)(O)OCc1nc2C(=O)NC(=Nc2nc1)N
FormulaC7 H8 N5 O5 P
NamePTERIN-6-YL-METHYL-MONOPHOSPHATE
ChEMBLCHEMBL1159902
DrugBankDB03592
ZINCZINC000005973848
PDB chain6ucz Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ucz Crystal structure of dihydropteroate synthase from Anaplasma phagocytophilum with bound 6-hydroxymethylpterin-monophosphate
Resolution2.0 Å
Binding residue
(original residue number in PDB)		D114 N133 Q135 M157 D205 F210 G237 K241 R274 H276
Binding residue
(residue number reindexed from 1)		D76 N95 Q97 M119 D167 F172 G199 K203 R236 H238
Annotation score1
Enzymatic activity
Enzyme Commision number 2.5.1.15: dihydropteroate synthase.
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Thu Dec 19 17:18:20 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6ucz', asym_id = 'A', bs = 'BS01', title = 'Crystal structure of dihydropteroate synthase fr...um with bound 6-hydroxymethylpterin-monophosphate'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6ucz', asym_id='A', bs='BS01', title='Crystal structure of dihydropteroate synthase fr...um with bound 6-hydroxymethylpterin-monophosphate')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004156,0009396,0042558,0044237', uniprot = '', pdbid = '6ucz', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004156,0009396,0042558,0044237', uniprot='', pdbid='6ucz', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>