Structure of PDB 6tmt Chain A Binding Site BS01

Receptor Information

>6tmt Chain A (length=545) Species: 273133 (Pseudomonas phage EL)

SQTLLVHGKDAQGIIKQVLSEVYDAVTSTMGPNGQLVMIKNGVSTKTTKD
GVTVARSIRFADEAHELVNRVITEPATKTDEECGDGTTTTIMLTHALYHL
FKDFPGFQHHRNIEDLVERVIQRLESMAIRVEVDDPRLYQVALTSSNQDE
KLARLVSELYANNKGSYPDIELKEGVNFEDQIEQTTGRTIRMFYANPWFA
KGHQGGVTELTGFTAFVIDRRIDKEDTQKLIDGVNHLVKTHKQHLALPIL
LIARSFEEAANSTLMQLNAAHPTLVEDGRPWLIPLSTPGTSELQDIAVML
NAPMLSDVADLTKLDTHSINGQHGQLELGGNRSILKSTTPKDEDRIEQHA
RGIEELLEGFSLSDKFSVRARYNERRIRTLRGKLITISVGGETYSEVKER
VDRYEDVVKAIRSALENGILPGGGVSLVKAVFGTIKEGLEDKDQSAEFAK
RYINSGIANELMRLSTIQHKLLFKDTALYKENGSFHFNDDWLNTPTVMNL
ATGEIGTPEGLGIYDTAYASITALKGGLQTAKILATTKTLILGEK

Ligand information

• Ligand ID: MG
• InChI: InChI=1S/Mg/q+2
• InChIKey: JLVVSXFLKOJNIY-UHFFFAOYSA-N
• SMILES:
  ACDLabs 10.04
  OpenEye OEToolkits 1.5.0: [Mg+2]
  CACTVS 3.341: [Mg++]
• Formula: Mg
• Name: MAGNESIUM ION
• DrugBank: DB01378
• PDB chain: 6tmt Chain A Residue 601

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6tmt Structure and conformational cycle of a bacteriophage-encoded chaperonin.
• Resolution: 4.03 Å
• Binding residue (original residue number in PDB): D86 D412
• Binding residue (residue number reindexed from 1): D85 D406
• Annotation score: 4

Gene Ontology

Molecular Function

• GO:0005524 ATP binding
• GO:0042802 identical protein binding
• GO:0046872 metal ion binding
• GO:0140662 ATP-dependent protein folding chaperone

Biological Process

• GO:0006457 protein folding
• GO:0042026 protein refolding

External links

• PDB: RCSB:6tmt, PDBe:6tmt, PDBj:6tmt
• PDBsum: 6tmt
• PubMed: 32339190
• UniProt: Q2Z0T5