Structure of PDB 6sl2 Chain A Binding Site BS01

Receptor Information
>6sl2 Chain A (length=619) Species: 5759 (Entamoeba histolytica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMADSELVAQWEKVQIKTFTKWVNMHLAKKGRKINDVTTDFKNGVELCAL
LEIIGETTIKCVTNPKMRIQMTENLDKALRFIQSRDVKLTGIGPTDIVDG
NVKLTLGLVWTLILRFAISELSAEGLSAKQGLLLWCQKKCEPYPVKVENF
SESFKDGKVFCALIHRHRPDLLDWETVGEDDRANLEKAFDVAEKELGIPK
LLDVDDIVNMPRPDERSVMTYVAALYKVFSSNDQVEKAGKRAGNFLDLLR
ATEGMVHDYEQRAQALKENIEAAINKMNGVEPSDEYHQVKEQINETKNYR
KGDKRAFIKEQGDLATLFGQINSKLRGMKRPVYVAPEGLDPKSLEGYIAN
ISEAERALRSKLNTAMRNCLIALRKAFADPANATDAKINEYRTFVTDETS
EAPLEEQVATLKAKLEELKQVEAQLPPIEEAEKACGDANIEDNEYTDVSF
DDLQFNYEQTVSMFEKKIVYIEAQINEASSGVTAEQMQEFKQSFDAFDGN
HDGILDKLEFRSCLSSMGLIDIDFTGGEDAQYDAIYNNVTKGENGVSFDN
YVQYMKEKNDENPSPEQLNEIFSTIAAGKDSITETDMQKAGMSAEQIEYV
KANLPQKGDGYDYAAWVKT
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6sl2 Chain A Residue 700 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6sl2 Calcium modulates the domain flexibility and function of an alpha-actinin similar to the ancestral alpha-actinin.
Resolution3.1 Å
Binding residue
(original residue number in PDB)
D497 N499 D501 I503 D505 E508
Binding residue
(residue number reindexed from 1)
D498 N500 D502 I504 D506 E509
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003779 actin binding
GO:0005509 calcium ion binding
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6sl2, PDBe:6sl2, PDBj:6sl2
PDBsum6sl2
PubMed32848067
UniProtC4LWU6

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