Structure of PDB 6s48 Chain A Binding Site BS01
Receptor Information
>6s48 Chain A (length=235) Species:
103690
(Nostoc sp. PCC 7120 = FACHB-418) [
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KFIQNAAEIAKKAMDSVDPSLSEKFTIVIRFLTDNPDAASALKGKERSIV
GTEEYIIASATNFKKGRDPRTPLPPSTIPDEMVSVILNKYFEVPSEELEK
AEEWHRLSMGAENIVGDLLERYIAEVIEPHGWIWCSGSMVRAVDFIYCDS
ENVWQSLQVKNRDNTENSSSAAIRHGTPIKKWFRTFSKKRGDNWDKFPSL
EGKENLSEKGFKLYVEKYLSALRAIKALEHHHHHH
Ligand information
>6s48 Chain C (length=11) [
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gatggtcctac
Receptor-Ligand Complex Structure
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PDB
6s48
Restriction endonucleases that cleave RNA/DNA heteroduplexes bind dsDNA in A-like conformation.
Resolution
1.9 Å
Binding residue
(original residue number in PDB)
S43 E115 N116 G119 K163 N164 R165 N167 T168
Binding residue
(residue number reindexed from 1)
S40 E112 N113 G116 K160 N161 R162 N164 T165
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0009036
type II site-specific deoxyribonuclease activity
GO:0046872
metal ion binding
Biological Process
GO:0009307
DNA restriction-modification system
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Molecular Function
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Biological Process
External links
PDB
RCSB:6s48
,
PDBe:6s48
,
PDBj:6s48
PDBsum
6s48
PubMed
32459314
UniProt
Q8YYB7
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