Structure of PDB 6s1v Chain A Binding Site BS01

Receptor Information
>6s1v Chain A (length=103) Species: 11855 (Mason-Pfizer monkey virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
WVQPITCQKPSLTLWLDDKMFTGLINTGADVTIIKLEDWPPNWPITDTLT
NLRNNPKQSSKYLTWRDKENNSGLIKPFVIPNLPVNLWGRDLLSQMKIMM
CSP
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6s1v Comparison of a retroviral protease in monomeric and dimeric states.
Resolution1.64 Å
Binding residue
(original residue number in PDB)		G28 D30 I33 N51 R53
Binding residue
(residue number reindexed from 1)		G28 D30 I33 N51 R53
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
3.6.1.23: dUTP diphosphatase.
Gene Ontology
Molecular Function
GO:0004190 aspartic-type endopeptidase activity
Biological Process
GO:0006508 proteolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6s1v, PDBe:6s1v, PDBj:6s1v
PDBsum6s1v
PubMed31588922
UniProtP07572|POL_MPMV Gag-Pro-Pol polyprotein (Gene Name=gag-pro-pol)

[Back to BioLiP]