Structure of PDB 6qzk Chain A Binding Site BS01

Receptor Information
>6qzk Chain A (length=746) Species: 1492 (Clostridium butyricum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ANNLTFEAFEGIGQLNELNFYKYRLIGKGQIDNVHQAIWSVKYKLQANNF
FKPVFVKGEILYSLDELKVIPEFENVEVILDGNIILSISENTDIYKDVIV
FYINNALKNIKDITNYRKYITKNTDEIICKSILTTNLKYQYMKSEKGFKL
QRKFKISPVVFRNGKVILYLNCSSDFSTDKSIYEMLNDGLGVVGLQVKNK
WTNANGNIFIEKVLDNTISDPGTSGKLGQSLIDYYINGNQKYRVEKFTDE
DKNAKVIQAKIKNKTYNYIPQALTPVITREYLSHTDKKFSKQIENVIKMD
MNYRYQTLKSFVEDIGVIKELNNLHFKNQYYTNFDFMGFESGVLEEPVLM
GANGKIKDKKQIFINGFFKNPKENVKFGVLYPEGCMENAQSIARSILDFA
TAGKYNKQENKYISKNLMNIGFKPSECIFESYKLGDITEYKATARKLKEH
EKVGFVIAVIPDMLEVENPYNPFKKVWAKLNIPSQMITLKTTEKFKNIVD
KSGLYYLHNIALNILGKIGGIPWIIKDMPGNIDCFIGLAVGTREKGIHFP
ACSVLFDKYGKLINYYKPTIPQSGEKIAETILQEIFDNVLISYKEENGEY
PKNIVIHRAGFSRENIDWYKEYFDKKGIKFNIIEVKKNIPVKIAKVVGSN
ICNPIKGSYVLKNDKAFIVTTDIKDGVASPNPLKIEKTYGDVEMKSILEQ
IYSLSQIHVGSTKSLRLPITTGYADKICKAIEYIPQGVVDNRLFFL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6qzk DNA-guided DNA cleavage at moderate temperatures by Clostridium butyricum Argonaute.
Resolution3.548 Å
Binding residue
(original residue number in PDB)		H35 S173 S174 D175 F176 K198 N205 G206 N207 I277 T278 K298 M299 Y472 Q487 M488 I489 T490 Y507 Y508 N511 I512 K519 K547 G548 E577 K644 T673 S681 H710 K715 L717 R718 L748
Binding residue
(residue number reindexed from 1)		H35 S173 S174 D175 F176 K198 N205 G206 N207 I277 T278 K298 M299 Y470 Q485 M486 I487 T488 Y505 Y506 N509 I510 K517 K545 G546 E575 K642 T671 S679 H708 K713 L715 R716 L746
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Sun Nov 24 19:19:11 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6qzk', asym_id = 'A', bs = 'BS01', title = 'DNA-guided DNA cleavage at moderate temperatures by Clostridium butyricum Argonaute.'
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6qzk', asym_id='A', bs='BS01', title='DNA-guided DNA cleavage at moderate temperatures by Clostridium butyricum Argonaute.')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0003676,0003723', uniprot = '', pdbid = '6qzk', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0003676,0003723', uniprot='', pdbid='6qzk', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>