Structure of PDB 6qtv Chain A Binding Site BS01

Receptor Information
>6qtv Chain A (length=305) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TRYSRLRVIAEIRNIVSSIEFDRDDELFATAGVSRCIKVFDFSSVVNEPQ
CPIVEMSTRSKLSCLSWNKHEKNHIASSDYEGIVTVWDVTTRQSLMEYEE
HEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKANICCV
KYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNN
ELASASTDSTLRLWDVKDNLPVRTFRGHTNEKNFVGLTVNSEYLACGSET
NEVYVYHKEITRPVTSHRFGSAGSYFISAVCWKSDSPTMLTANSQGTIKV
LVLAA
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6qtv Plant photoreceptors and their signaling components compete for COP1 binding via VP peptide motifs.
Resolution1.31 Å
Binding residue
(original residue number in PDB)
I373 S375 K422 Y441 W467 C509 A551 T568 K593 N594 F595
Binding residue
(residue number reindexed from 1)
I15 S17 K61 Y80 W106 C148 A190 T207 K232 N233 F234
Enzymatic activity
Enzyme Commision number 2.3.2.27: RING-type E3 ubiquitin transferase.
Gene Ontology
Molecular Function
GO:0061630 ubiquitin protein ligase activity

View graph for
Molecular Function
External links
PDB RCSB:6qtv, PDBe:6qtv, PDBj:6qtv
PDBsum6qtv
PubMed31304983
UniProtP43254|COP1_ARATH E3 ubiquitin-protein ligase COP1 (Gene Name=COP1)

[Back to BioLiP]