Structure of PDB 6qdj Chain A Binding Site BS01
Receptor Information
>6qdj Chain A (length=758) Species:
6239
(Caenorhabditis elegans) [
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MEHEKDPGWQYLRRTREQVLEDQSKPYDSKKNVWIPDPEEGYLAGEITAT
KGDQVTIVTARGNEVTLKKELVQEMNPPKFEKTEDMSNLSFLNDASVLHN
LRSRYAAMLIYTYSGLFCVVINPYKRLPIYTDSCARMFMGKRKTEMPPHL
FAVSDEAYRNMLQDHENQSMLITGESGAGKTENTKKVICYFAAVGASKVT
LEDQIVQTNPVLEAFGNAKTVRNNNSSRFGKFIRIHFNKHGRLASCDIEH
YLLEKSRVIRQAPGERCYHIFYQIYSDFRPELKKELLLDLPIKDYWFVAQ
AELIIDGIDDVEEFQLTDEAFDILNFSAVEKQDCYRLMSAHMHMGNMKFK
QRPREEQAEPDGTDEAEKASNMYGIGCEEFLKALTKPRVKVTEWVSKGQN
CEQVNWAVGAMAKGLYSRVFNWLVKKCNLTLDQKGIDRDYFIGVLDIAGF
EIFDFNSFEQLWINFVNEKLQQFFNHHMFVLEQEEYAREGIQWVFIDFGL
DLQACIELIEKPLGIISMLDEECIVPKATDLTLASKLVDQHLGKHPNFEK
PKPPKGKQGEAHFAMRHYAGTVRYNCLNWLEKNKDPLNDTVVSAMKQSKG
NDLLVEIWQDYTTQEEAAFMTVSMLYRESLNNLMTMLNKTHPHFIRCIIP
NEKKQSGMIDAALVLNQLTCNGVLEGIRICRKGFPNRTLHPDFVQRYAIL
AAKEAKSDDDKKKCAEAIMSKLVNDGSLSEEMFRIGLTKVFFKAGVLAHL
EDIRDEKL
Ligand information
Ligand ID
ADP
InChI
InChI=1S/C10H15N5O10P2/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(24-10)1-23-27(21,22)25-26(18,19)20/h2-4,6-7,10,16-17H,1H2,(H,21,22)(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
XTWYTFMLZFPYCI-KQYNXXCUSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CO[P@](=O)(O)OP(=O)(O)O)O)O)N
CACTVS 3.341
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=P(O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
CACTVS 3.341
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P@@](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)O)O)O)N
Formula
C10 H15 N5 O10 P2
Name
ADENOSINE-5'-DIPHOSPHATE
ChEMBL
CHEMBL14830
DrugBank
DB16833
ZINC
ZINC000012360703
PDB chain
6qdj Chain A Residue 801 [
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Receptor-Ligand Complex Structure
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PDB
6qdj
Molecular features of the UNC-45 chaperone critical for binding and folding muscle myosin.
Resolution
1.884 Å
Binding residue
(original residue number in PDB)
N122 P123 G177 G179 K180 T181 E182 N236
Binding residue
(residue number reindexed from 1)
N122 P123 G177 G179 K180 T181 E182 N223
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003774
cytoskeletal motor activity
GO:0005524
ATP binding
GO:0051015
actin filament binding
Cellular Component
GO:0016459
myosin complex
View graph for
Molecular Function
View graph for
Cellular Component
External links
PDB
RCSB:6qdj
,
PDBe:6qdj
,
PDBj:6qdj
PDBsum
6qdj
PubMed
31636255
UniProt
P02566
|MYO4_CAEEL Myosin-4 (Gene Name=unc-54)
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