Structure of PDB 6psf Chain A Binding Site BS01

Receptor Information
>6psf Chain A (length=261) Species: 463676 (Rhinovirus C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VVPDTKPSGPQHTTKPSILGAMEIGASSNATPESTIETRYVYNTNTNAEA
DVEMFLGRSALWGKVTLTRQYAKWEINFQEQAHIRKKFEFFTYLRFDMEV
TIVTNNKGLMQIMFVPPGIDHPETHDDRKWDSASNPSVFFQPKSGFPRFT
IPFTGLASAYYMFYDGYDKPKGSDNNEYGIAPTNDMGLLCFRTLDNSGGN
DVKIYVKPKHITAWVPRPPRATQYTHKYSTNYHYKPNSSGPDEHVLKDRH
FIKTRPLISSA
Ligand information
>6psf Chain D (length=25) Species: 463676 (Rhinovirus C) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
NINYYKDSASSGLSRDPSKFTQPLV
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6psf Cryo-EM structure of rhinovirus C15a bound to its cadherin-related protein 3 receptor.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		S45 N47 E71 K227 H228 P234
Binding residue
(residue number reindexed from 1)		S27 N29 E53 K209 H210 P216
Enzymatic activity
Enzyme Commision number 2.7.7.48: RNA-directed RNA polymerase.
3.4.22.28: picornain 3C.
3.4.22.29: picornain 2A.
3.6.1.15: nucleoside-triphosphate phosphatase.
External links
PDB RCSB:6psf, PDBe:6psf, PDBj:6psf
PDBsum6psf
PubMed32152109
UniProtE5D8F2|POLG_HRV15 Genome polyprotein

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