Structure of PDB 6o8e Chain A Binding Site BS01

Receptor Information
>6o8e Chain A (length=592) Species: 1395 ([Bacillus] caldotenax) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EGRFQLVAPYEPQGDQPQAIAKLVDGLRRGVKHQTLLGATGTGKTFTISN
VIAQVNKPTLVIAHNKTLAGQLYSELKEFFPHNAVEYFVSYYDYYQPEAY
VPQTDTYIEKDAKINDEIDKLRHSATSALFERRDVIIVASVSSIYGLGSP
EEYRELVVSLRVGMEIERNALLRRLVDIQYDRNDIDFRRGTFRVRGDVVE
IFPASRDEHSIRVEFFGDEIERIREVDALTGEVLGEREHVAIFPASHFVC
REEKMRLAIQNIEQELEERLAELRAQGKLLEAQRLEQRTRYDLEMMREMG
FSSGIENYSRHLALRPPGSTPYTLLDYFPDDFLIIVDESHVTLPQLRGMY
NGDRARKQVLVDHGFRLPSALDNRPLTFEEFEQKINQIIYVSATPGPYEL
EHSPGVVEQIIRPTGLLDPTIDVRPTKGQIDDLIGEIRERVERNERTLVT
TLTKKMAEDLTDYLKEAGIKVAYLHSEIKTLERIEIIRDLRLGKYDVLVG
INLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNANGHVIM
YADTITKSMEIAIQETKRRRAIQEEYNRKHGIVPRTVKKEIR
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6o8e Mechanism of DNA Lesion Homing and Recognition by the Uvr Nucleotide Excision Repair System.
Resolution2.61 Å
Binding residue
(original residue number in PDB)
N66 K67 S91 Y92 Y93 Y96 A113 S141 S143 Y146 F249 F302 S304 G305 E307 Q346 M350 T454 K455 H476 S477 R484 I502 N503 L504 F527
Binding residue
(residue number reindexed from 1)
N65 K66 S90 Y91 Y92 Y95 A112 S140 S142 Y145 F248 F301 S303 G304 E306 Q345 M349 T453 K454 H475 S476 R483 I501 N502 L503 F526
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0016887 ATP hydrolysis activity
Biological Process
GO:0006289 nucleotide-excision repair
Cellular Component
GO:0009380 excinuclease repair complex

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:6o8e, PDBe:6o8e, PDBj:6o8e
PDBsum6o8e
PubMed31549070
UniProtP56981|UVRB_BACCA UvrABC system protein B (Gene Name=uvrB)

[Back to BioLiP]