Structure of PDB 6nvy Chain A Binding Site BS01
Receptor Information
>6nvy Chain A (length=191) Species:
1221996
(Bacillus thermotolerans) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GDVTVIRDQYGVPHLYAKNKQDLYKAYGYVMAKDRLFQLEMFRRGNEGTV
SEVFGEEYLAKDEQSRRDGYSDEEIKEMLNDLEDKPRAYIQQFAEGISLY
VQEALKNPDEKLSKEFHDYKFLPRKWDATDVVRLYLVSMTYFMDNHQELT
NAEILAKLEQTYGEEQAEKMFDDLVWKNDPEAPASIQAEDE
Ligand information
Ligand ID
CA
InChI
InChI=1S/Ca/q+2
InChIKey
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Ca+2]
Formula
Ca
Name
CALCIUM ION
ChEMBL
DrugBank
DB14577
ZINC
PDB chain
6nvy Chain A Residue 301 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6nvy
Crystal structures and protein engineering of three different penicillin G acylases from Gram-positive bacteria with different thermostability.
Resolution
2.27 Å
Binding residue
(original residue number in PDB)
E53 D136
Binding residue
(residue number reindexed from 1)
E47 D130
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0016787
hydrolase activity
GO:0016811
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
Biological Process
GO:0017000
antibiotic biosynthetic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:6nvy
,
PDBe:6nvy
,
PDBj:6nvy
PDBsum
6nvy
PubMed
31227867
UniProt
A0A0F5I5V4
[
Back to BioLiP
]