Structure of PDB 6nud Chain A Binding Site BS01

Receptor Information
>6nud Chain A (length=108) Species: 1308 (Streptococcus thermophilus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KAERAISLLEKDNKGNYLLTTSQIRKLLSLCSSLYDRSKERKFDELINDV
SYLRVQFVYQAGREIAVKDLIEKAQILEALKEIKDRETLQRFCRYMEALV
AYFKFYGG
Ligand information
>6nud Chain U (length=28) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
aagugaacagaauuaaacaguuacgaaa
............................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6nud Coupling of ssRNA cleavage with DNase activity in type III-A CRISPR-Csm revealed by cryo-EM and biochemistry.
Resolution3.5 Å
Binding residue
(original residue number in PDB)		T31 S33 Q34
Binding residue
(residue number reindexed from 1)		T20 S22 Q23
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0051607 defense response to virus

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6nud, PDBe:6nud, PDBj:6nud
PDBsum6nud
PubMed30814678
UniProtA0A0A7HIX1|CSM2_STRTR CRISPR system Cms protein Csm2 (Gene Name=csm2)

[Back to BioLiP]