Structure of PDB 6nee Chain A Binding Site BS01

Receptor Information
>6nee Chain A (length=250) Species: 32630 (synthetic construct) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SRKFFVGGNWKMNGTLESIKALVETLNSAQLDPNTEVVVAPPAIYLPFAR
SKLKKPKEIQVAAQNCYTKPNGAFTGEISAEMLKDLGVPWVILGHSERRT
IFGESDELIAEKVKYALDQGLKVIACIGETLEEREAGKTMEVVARQILKA
IADKIKDWSNVVIAYEPVWAIGTGKVATPEQAQEVHAALRKWLKENVSPE
VAESTRIIYGGSVNAANCKELAKQPDIDGFLVGGASLKAPEFVDIINARQ
Ligand information
Ligand IDPGH
InChIInChI=1S/C2H6NO6P/c4-2(3-5)1-9-10(6,7)8/h5H,1H2,(H,3,4)(H2,6,7,8)
InChIKeyBAXHHWZKQZIJID-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04O=P(O)(O)OCC(=O)NO
OpenEye OEToolkits 1.5.0C(C(=O)NO)OP(=O)(O)O
CACTVS 3.341ONC(=O)CO[P](O)(O)=O
FormulaC2 H6 N O6 P
NamePHOSPHOGLYCOLOHYDROXAMIC ACID
ChEMBLCHEMBL371668
DrugBankDB03026
ZINC
PDB chain6nee Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6nee Structural, thermodynamic and catalytic characterization of an ancestral triosephosphate isomerase reveal early evolutionary coupling between monomer association and function.
Resolution1.9 Å
Binding residue
(original residue number in PDB)		K12 H96 E167 I172 G173 G212 S213 L232 G234 G235
Binding residue
(residue number reindexed from 1)		K11 H95 E166 I171 G172 G211 S212 L231 G233 G234
Annotation score2
Gene Ontology
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UnboundLocalError		Python 3.6.8: /usr/bin/python3
Fri Nov 22 07:15:33 2024

A problem occurred in a Python script. Here is the sequence of function calls leading up to the error, in the order they occurred.

 /var/www/html/BioLiP/pdb.cgi in <module>()
   1435     title=pdb2title(pdbid)
   1436     if bs.startswith("BS"):
=> 1437         pubmed,uniprot=display_interaction(pdbid,asym_id,bs,title)
   1438     else:
   1439         if lig3:
pubmed = '', uniprot = '', display_interaction = <function display_interaction>, pdbid = '6nee', asym_id = 'A', bs = 'BS01', title = 'Structural, thermodynamic and catalytic characte...upling between monomer association and function. '
 /var/www/html/BioLiP/pdb.cgi in display_interaction(pdbid='6nee', asym_id='A', bs='BS01', title='Structural, thermodynamic and catalytic characte...upling between monomer association and function. ')
   1295         display_ec(ec,csaOrig,csaRenu)
   1296     if go:
=> 1297         display_go(go,uniprot,pdbid,asym_id)
   1298     return pubmed,uniprot
   1299 
global display_go = <function display_go>, go = '0004807,0006096', uniprot = '', pdbid = '6nee', asym_id = 'A'
 /var/www/html/BioLiP/pdb.cgi in display_go(go='0004807,0006096', uniprot='', pdbid='6nee', asym_id='A')
    480         '''.replace("$namespace_link",namespace_link
    481           ).replace("$namespace",namespace
=>  482           ).replace("$uniprot",u
    483         ))
    484         for l,(term,name) in enumerate(go2aspect[Aspect]):
u undefined

UnboundLocalError: local variable 'u' referenced before assignment
      args = ("local variable 'u' referenced before assignment",)
      with_traceback = <built-in method with_traceback of UnboundLocalError object>