Structure of PDB 6m7y Chain A Binding Site BS01

Receptor Information
>6m7y Chain A (length=952) Species: 1360 (Lactococcus lactis subsp. lactis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SFKAQPFLVRNTILCPNDKRSFTEYTQVIETVSKNKVFLEQLLLANPKLY
DVMQKYNAGLLKKKRVKKLFESIYKYYKRSYLRSTPFGLFSETSIGVFSK
SSQYKLMGKTTKGIRLDTQWLIRLVHKMEVDFSKKLSFTRNNANYKFGDR
VFQVYTINSSELEECNIKYTNVYQIISEFCENDYQKYEDICETVTLCYGD
EYRELSEQYLGSLIVNHYLISNLQKDLLSDFSWNTFLTKVEAIDEDKKYI
IPLKKVQKFIQEYSEIEIGEGIEKLKEIYQEMSQILENDNYIQIDLISDS
EINFDVKQKQQLEHLAEFLGNTTKSVRRTYLDDYKDKFIEKYGVDQEVQI
TELFDSTFGIGAPYNYNHPRNDFYESEPSTLYYSEEEREKYLSMYVEAVK
NHNVINLDDLESHYQKMDLEKKSELQGLELFLNLAKEYEKDIFILGDIVG
NNNLGGASGRFSALSPELTSYHRTIVDSVERENENKEITSCEIVFLPENI
RHANVMHTSIMRRKVLPFFTSTSHNEVLLTNIYIGIDEKEKFYARDISTQ
EVLKFYITSMYNKTLFSNELRFLYEISLDDKFGNLPWELIYRDFDYIPRL
VFDEIVISPAKWKIWGRDVNSKMTIRELIQSKEIPKEFYIVNGDNKVYLS
QKNPLDMEILESAIKKSSKRKDFIELQEYFEDENIINKGEKGRVADVVVP
FIRAFIREKRVSVERREKLPFNEWLYLKLYISINRQNEFLLSYLPDIQKI
VANLGGNLFFLRYTDPKPHIRLRIKCSDLFLAYGSILEILKRSRKNRIMS
TFDISIYDQEVERYGGFDTLELSEAIFCADSKIIPNLLTLIKDTNNDWKV
DDVSILVNYLYLKCFFQNDNKKILNFLNLVGDQIFYDKNFKELKHAIKNL
FLKMIAQDFELQKVYSIIDSIIHVHNNRLIGIERDKEKLIYYTLQRLFVS
EE
Ligand information
>6m7y Chain C (length=15) Species: 1358 (Lactococcus lactis) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
TKDFNLDLVCVSKTI
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6m7y Characterization of glutamyl-tRNA-dependent dehydratases using nonreactive substrate mimics.
Resolution2.794 Å
Binding residue
(original residue number in PDB)		R154 L166 E167 E168 C169 N170 I171 T174 N175 V176 V198 Y202 Y206 L209 S210 Y213
Binding residue
(residue number reindexed from 1)		R150 L162 E163 E164 C165 N166 I167 T170 N171 V172 V194 Y198 Y202 L205 S206 Y209
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Cellular Component
GO:0005886 plasma membrane

View graph for
Cellular Component
External links
PDB RCSB:6m7y, PDBe:6m7y, PDBj:6m7y
PDBsum6m7y
PubMed31409709
UniProtP20103|NISB_LACLL Nisin biosynthesis protein NisB (Gene Name=nisB)

[Back to BioLiP]