Structure of PDB 6kqt Chain A Binding Site BS01

Receptor Information
>6kqt Chain A (length=619) Species: 1256908 (Eubacterium ramulus ATCC 29099) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NQQEIYAAYRVANLLGVYEDCSPNGFYQRWKQKNAFMKAQAEEFGIGSTD
HFIDDVERIVDQRRAETEWKNADAWKNGTAAFGARYLTPEMYLDYELKSI
QLAFATYKGELVGNHKCHVYTEDEKRAFYDANQDLFTRYHGDLFSYEEVD
LIIEKWLKVQEYQDIIESVVANTDNAVRWITEFEKIWNQMQEEKRLRGHC
YYVSSIHGDDANDGTEDQPLKSLYAVNRLDLQPGDQVLLERGSVFENQFL
HLNVQGTKEQPIYIGAYGNGAKPLIQTNGQGIWYQDYGNELDAPTHVYRG
YVSSAVLLYDCEYLTVENLEISNKGGVFGETYSAPHKMNRTGVAGIAKNR
GTLHEIHLSNLYIHDVEGNVYDKHMNNGGIYFTCLKPEAEEKTGVARYEN
VSVRGCHLKRTSRWGIAVGYSYKCKEFMTAELPDELFERYGHHNIYIADN
YVEEIGGDGITVMYAMKPLVEYNSGDSCALEMNDRYYTEPEDRAGKVAAG
IWPWKCKDALLTYNEMRDMRLNQDSMAWDADSGDGTLYQYNYSHLNEGGC
VMFCLEEAIHNEFRYNVSVDDLGGLISPSGNPDAWIHHNVFYRRAEVPFV
RPHMDDGKYVAEENEIHLI
Ligand information
Ligand IDGAL
InChIInChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3+,4+,5-,6-/m1/s1
InChIKeyWQZGKKKJIJFFOK-FPRJBGLDSA-N
SMILES
SoftwareSMILES
CACTVS 3.370OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@H]1O
OpenEye OEToolkits 1.7.2C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
ACDLabs 12.01OC1C(O)C(OC(O)C1O)CO
OpenEye OEToolkits 1.7.2C([C@@H]1[C@@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
FormulaC6 H12 O6
Namebeta-D-galactopyranose;
beta-D-galactose;
D-galactose;
galactose
ChEMBLCHEMBL300520
DrugBank
ZINCZINC000002597049
PDB chain6kqt Chain B Residue 2 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6kqt Butyrate producing colonic Clostridiales metabolise human milk oligosaccharides and cross feed on mucin via conserved pathways.
Resolution2.0 Å
Binding residue
(original residue number in PDB)		D336 H340 K417 H418 Y464 W548
Binding residue
(residue number reindexed from 1)		D292 H296 K373 H374 Y420 W504
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links