Structure of PDB 6kbc Chain A Binding Site BS01

Receptor Information
>6kbc Chain A (length=378) Species: 306901 (Chaetomium globosum CBS 148.51) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PFISLLQGDQFLADTPIPGSAVIPNSGNLFPKWADKLSPTAVETWLFDAM
AEDGSAAFTVSFFRDGSQAPASFRAAINAAWSDGTVWSQHLVVPVSVVTS
DGPDVGHGHVAGVWRTERTTASFDVAADLSTTTVVFDAPGRITGSLTHRS
LGYPTLPQSDREAEVAPGAYWFRPIAMANATVDLTFHIDKTEKRMVLGPE
QGAFGGMDRSWLPMVWGKEATDALFVRAQAGPYVMAVMRLVSKPHKYYQN
TVNAALYRDGKIVSNALRSLPPDRRDTAATADAVRTEKLYDGDGLVAKYR
DKNVGYRLEFRSAGPEREKWSFDLRHHQAWWAKPTSRPGPDGTGNSGFVV
EVTGGLVGSEESVHGWGMTGEVELSDGH
Ligand information
Ligand IDWK1
InChIInChI=1S/C25H35NO6/c1-6-13(3)16-8-7-15-10-12(2)9-14(4)18(15)19(16)22(28)20-21(27)17(26-23(20)29)11-25(5,32)24(30)31/h6-8,12,14-19,28,32H,9-11H2,1-5H3,(H,26,29)(H,30,31)/b13-6+,22-20+/t12-,14+,15-,16+,17-,18-,19-,25-/m0/s1
InChIKeyAVZATKWNGXCSDN-RQCLIRHHSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7CC=C(C)C1C=CC2CC(CC(C2C1C(=C3C(=O)C(NC3=O)CC(C)(C(=O)O)O)O)C)C
CACTVS 3.385C\C=C(C)\[C@H]1C=C[C@H]2C[C@@H](C)C[C@@H](C)[C@@H]2[C@H]1C(\O)=C3/C(=O)N[C@@H](C[C@](C)(O)C(O)=O)C3=O
OpenEye OEToolkits 2.0.7C/C=C(\C)/[C@H]1C=C[C@H]2C[C@H](C[C@H]([C@@H]2[C@H]1/C(=C\3/C(=O)[C@@H](NC3=O)C[C@@](C)(C(=O)O)O)/O)C)C
CACTVS 3.385CC=C(C)[CH]1C=C[CH]2C[CH](C)C[CH](C)[CH]2[CH]1C(O)=C3C(=O)N[CH](C[C](C)(O)C(O)=O)C3=O
FormulaC25 H35 N O6
Name(2S)-3-[(2S,4E)-4-[[(1R,2S,4aR,6S,8R,8aS)-2-[(E)-but-2-en-2-yl]-6,8-dimethyl-1,2,4a,5,6,7,8,8a-octahydronaphthalen-1-yl]-oxidanyl-methylidene]-3,5-bis(oxidanylidene)pyrrolidin-2-yl]-2-methyl-2-oxidanyl-propanoic acid
ChEMBL
DrugBank
ZINC
PDB chain6kbc Chain A Residue 501 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6kbc Catalytic mechanism and endo-to-exo selectivity reversion of an octalin-forming natural Diels-Alderase
Resolution1.99 Å
Binding residue
(original residue number in PDB)
S65 F67 N82 H94 W235 M257 W350 K352 N364
Binding residue
(residue number reindexed from 1)
S61 F63 N78 H90 W216 M238 W331 K333 N345
Annotation score4
Enzymatic activity
Enzyme Commision number 5.5.1.-
External links
PDB RCSB:6kbc, PDBe:6kbc, PDBj:6kbc
PDBsum6kbc
PubMed
UniProtQ2HBN6|CGHA_CHAGB Diels-Alderase cghA (Gene Name=cghA)

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