Structure of PDB 6k0a Chain A Binding Site BS01

Receptor Information
>6k0a Chain A (length=126) Species: 243232 (Methanocaldococcus jannaschii DSM 2661) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
IEMLKTLPPTLREKKRYIAFKILYDEELKEGEVVNLIRKAVLEYYGSWGT
SKANPWLVYYDFPYGILRCQRDNVDYVKASLILIREFKEKPVNIICLGVS
GTIRKAKIKFLGIKKPKRWFVIRRER
Ligand information
>6k0a Chain X (length=258) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggagggggcuggugacuuuccccucuuuaagaggggaggaaguuccgccc
accccauuuaugggcagcguccccugagaaggggcgggagaugcagcaga
aacgacacggcuccggaagagaugacgaugauagugaaaguugaggacuu
ccggagaaccggugaaacgggcaucuccccugcccggggugcaagccggu
uucggcgcuuagccgaaugucaccgaaauuacagaaggcgggcuauagcc
cccauuuu
<<.<<<<<<<<<<<<<...<<<<<<<...>>>>>>>.....[[.(((((<
<<<<<......<<<<<....<<<<<....>>>>>.<<<<<<<<<......
.......<<<<<<<<<<<.......<...................>..>>
>>>>>>..>>>.........>>>>>>>>>.>>>>>>>>>>>...<<<<..
..>>>>............>>>>>>............)))))]]...>>>>
>>>.>>..
Receptor-Ligand Complex Structure
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PDB6k0a Cryo-electron microscopy structure of an archaeal ribonuclease P holoenzyme.
Resolution4.6 Å
Binding residue
(original residue number in PDB)		P10 T11 K16 R17 R72 L98 V100 T103 I104 R105 K106 K110 K118 W120 R125
Binding residue
(residue number reindexed from 1)		P9 T10 K15 R16 R71 L97 V99 T102 I103 R104 K105 K109 K117 W119 R124
Enzymatic activity
Enzyme Commision number 3.1.26.5: ribonuclease P.
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0004526 ribonuclease P activity
Biological Process
GO:0001682 tRNA 5'-leader removal
GO:0008033 tRNA processing
Cellular Component
GO:0005737 cytoplasm
GO:0030677 ribonuclease P complex
GO:1902555 endoribonuclease complex
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6k0a, PDBe:6k0a, PDBj:6k0a
PDBsum6k0a
PubMed31197137
UniProtQ57917|RNP2_METJA Ribonuclease P protein component 2 (Gene Name=rnp2)

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