Structure of PDB 6jev Chain A Binding Site BS01

Receptor Information
>6jev Chain A (length=171) Species: 1409923 (Acinetobacter baumannii MRSN 3527) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LLPILSFPDPRLRTIAKPVEEVTDEIRQLAADMFETMYAAPGIGLAASQV
DRHIQLIVMDLSESKDEPMVFINPKVTPLTEETQPYEEGCLSVPQIYDKV
DRPSRVKIEAINLEGQAFEIEADGLLAVCIQHEMDHLNGKLFVDYLSPLK
RQRAREKVEKIVRQREREKVA
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6jev Chain A Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6jev K2U bound crystal peptide deformylase from Acinetobacter baumanii
Resolution1.9 Å
Binding residue
(original residue number in PDB)		C92 H134 H138
Binding residue
(residue number reindexed from 1)		C90 H132 H136
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) G46 Q51 C92 L93 H134 E135 H138
Catalytic site (residue number reindexed from 1) G44 Q49 C90 L91 H132 E133 H136
Enzyme Commision number 3.5.1.88: peptide deformylase.
Gene Ontology
Molecular Function
GO:0016787 hydrolase activity
GO:0042586 peptide deformylase activity
GO:0046872 metal ion binding
Biological Process
GO:0006412 translation
GO:0018206 peptidyl-methionine modification

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Molecular Function
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Biological Process
External links
PDB RCSB:6jev, PDBe:6jev, PDBj:6jev
PDBsum6jev
PubMed
UniProtB0VNL8|DEF_ACIBS Peptide deformylase (Gene Name=def)

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