Structure of PDB 6iv7 Chain A Binding Site BS01
Receptor Information
>6iv7 Chain A (length=386) Species:
332952
(Aspergillus flavus NRRL3357) [
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ETVAAIKTLIQQLAQSTDQFGRAEINDALRELQYSLETPFDTVMRMSLDT
CQVAVARIGSDLGLFKHLSQCASPQSAEELADHLGCGRELMSRLLRYMAS
VRMVQQTDDIKYISSNITQTLAVPGLEAGMRHAFENLWPVLMALPDFLAE
RKYPDIVDAKDTAFQKAFNTDQDCFHWLATQPTRIANFKVLLTDERTPNF
LSTFPLEKELGSWSAEPEKALFVDIGGGMGHACIRLREKYPNQPGRVILQ
DLPPVLQAAQATLPLSGIESMPHNFHTPQPVQGAKFYFLRLILRDFPDHQ
ALEILQNIVPAMDAESRIVIDDGVPPEKGARWAETGTDICIMSALGSKER
TQRQWEELAAKAGLQLQALYQYTWPVVNAAMVFSLQ
Ligand information
Ligand ID
SAH
InChI
InChI=1S/C14H20N6O5S/c15-6(14(23)24)1-2-26-3-7-9(21)10(22)13(25-7)20-5-19-8-11(16)17-4-18-12(8)20/h4-7,9-10,13,21-22H,1-3,15H2,(H,23,24)(H2,16,17,18)/t6-,7+,9+,10+,13+/m0/s1
InChIKey
ZJUKTBDSGOFHSH-WFMPWKQPSA-N
SMILES
Software
SMILES
CACTVS 3.341
N[CH](CCSC[CH]1O[CH]([CH](O)[CH]1O)n2cnc3c(N)ncnc23)C(O)=O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)CSCCC(C(=O)O)N)O)O)N
CACTVS 3.341
N[C@@H](CCSC[C@H]1O[C@H]([C@H](O)[C@@H]1O)n2cnc3c(N)ncnc23)C(O)=O
ACDLabs 10.04
O=C(O)C(N)CCSCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.5.0
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)CSCC[C@@H](C(=O)O)N)O)O)N
Formula
C14 H20 N6 O5 S
Name
S-ADENOSYL-L-HOMOCYSTEINE
ChEMBL
CHEMBL418052
DrugBank
DB01752
ZINC
ZINC000004228232
PDB chain
6iv7 Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6iv7
The crystal structure of A SAM-Dependent enzyme from Aspergillus flavus
Resolution
1.937 Å
Binding residue
(original residue number in PDB)
G227 G229 D252 L253 H274 N275 F276 R291
Binding residue
(residue number reindexed from 1)
G226 G228 D251 L252 H273 N274 F275 R290
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.1.1.-
Gene Ontology
Molecular Function
GO:0008168
methyltransferase activity
GO:0008171
O-methyltransferase activity
Biological Process
GO:0009058
biosynthetic process
GO:0032259
methylation
View graph for
Molecular Function
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Biological Process
External links
PDB
RCSB:6iv7
,
PDBe:6iv7
,
PDBj:6iv7
PDBsum
6iv7
PubMed
UniProt
B8NJH3
|LEPI_ASPFN O-methyltransferase lepI (Gene Name=lepI)
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