Structure of PDB 6ip4 Chain A Binding Site BS01

Receptor Information

>6ip4 Chain A (length=471) Species: 3702 (Arabidopsis thaliana) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

DLKWTERLPECPVYRPTKEEFEDPLTYLQKIFPEASKYGICKIVSPLTAT
VPAGAVLMKEKSNFKFTTRVQPLRLAEWDSDDKVTFFMSGRTYTFRDYEK
MANKVFARRYCSGGSLPDSFLEKEFWKEIACGKTETVEYACDVDGSAFSS
APGDPLGSSKWNLNKVSRLPKSTLRLLETSIPGVTEPMLYIGMLFSMFAW
HVEDHYLYSINYQHCGASKTWYGIPGSAALKFEKVVKECVYNDDILSTNG
EDGAFDVLLGKTTIFPPKTLLDHNVPVYKAVQKPGEFVVTFPRAYHAGFS
HGFNCGEAVNFAMGDWFPFGAIASCRYAHLNRVPLLPHEELICKEAMLLN
SSSKSENLDLTPTELSGQRSIKTAFVHLIRFLHLARWSLMKSGLCTGLVS
NTYGTIVCSLCKRDCYLAFINCECYSHPVCLRHDVKKLDLPCGTTHTLYL
RDNIEDMEAAAMKFEKEDGVS

Ligand information

>6ip4 Chain B (length=8) Species: 3702 (Arabidopsis thaliana) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

AARKSAPA

Receptor-Ligand Complex Structure

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Structure summary

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PDB	6ip4 The Arabidopsis H3K27me3 demethylase JUMONJI 13 is a temperature and photoperiod dependent flowering repressor.
Resolution	2.6 Å
Binding residue (original residue number in PDB)	R161 V176 P274 Y282 N402
Binding residue (residue number reindexed from 1)	R69 V84 P182 Y190 N310

Enzymatic activity

Enzyme Commision number

1.14.11.-

External links

PDB	RCSB:6ip4, PDBe:6ip4, PDBj:6ip4
PDBsum	6ip4
PubMed	30899015
UniProt	F4KIX0\|JMJ13_ARATH Lysine-specific demethylase JMJ13 (Gene Name=JMJ13)

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