Structure of PDB 6ior Chain A Binding Site BS01
Receptor Information
>6ior Chain A (length=241) Species:
666
(Vibrio cholerae) [
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GSVREEIESLVQDSLMEMVKGVKNTIESDLASKKGLAQSTTEILQLDPTN
KAFAKSVLESPNLKGSFLAIGLGYESDATVVENDDGWEPNADYDPRKRPW
YVDAKRERKLVVTEPYVDISTKKIIISIGTPVYQQSNFVGAMFYDVELTQ
LAQLVNSVNLFDAGYLFITTKDGVTIAHPNAENNGEKFSQFLPNVDLKEG
TQRIELDGKYYLVKFAQVPSESWYIGAVVDESIAFAMVDDL
Ligand information
Ligand ID
ASN
InChI
InChI=1S/C4H8N2O3/c5-2(4(8)9)1-3(6)7/h2H,1,5H2,(H2,6,7)(H,8,9)/t2-/m0/s1
InChIKey
DCXYFEDJOCDNAF-REOHCLBHSA-N
SMILES
Software
SMILES
CACTVS 3.370
N[C@@H](CC(N)=O)C(O)=O
ACDLabs 12.01
O=C(N)CC(N)C(=O)O
CACTVS 3.370
N[CH](CC(N)=O)C(O)=O
OpenEye OEToolkits 1.7.2
C(C(C(=O)O)N)C(=O)N
OpenEye OEToolkits 1.7.2
C([C@@H](C(=O)O)N)C(=O)N
Formula
C4 H8 N2 O3
Name
ASPARAGINE
ChEMBL
CHEMBL58832
DrugBank
DB00174
ZINC
ZINC000001532556
PDB chain
6ior Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
6ior
Calcium Ions Modulate Amino Acid Sensing of the Chemoreceptor Mlp24 ofVibrio cholerae.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
Y120 R125 W127 Y143 D145 F170 D172
Binding residue
(residue number reindexed from 1)
Y93 R98 W100 Y116 D118 F143 D145
Annotation score
4
Binding affinity
MOAD
: Kd=6.3uM
PDBbind-CN
: -logKd/Ki=4.31,Kd=49.5uM
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6ior
,
PDBe:6ior
,
PDBj:6ior
PDBsum
6ior
PubMed
30745373
UniProt
Q9KQ43
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