Structure of PDB 6hy3 Chain A Binding Site BS01

Receptor Information
>6hy3 Chain A (length=269) Species: 63186 (Zobellia galactanivorans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SHHHHHHGSTYDFTGNTPPPAPQGMKWVKISQLSDEFNNGFNTDKWTKSL
WNYGVPVQMKAENSGVSDGKLWIKATLGNDPERWFETSRVMSKAQVNYPM
YTVSRIKGAHISAYNTFWLNNGNISNRNEIDVIENNSNPSCNCQPDFPWQ
MNSQYFHVVNDDTKRNKGNFDNRELSDANPLKGVAWNEEYHTFGVWWKDA
THIQFYLDGEPAGSVVSARDFTRELNIIWDLWTVDADWLGGLAKKEHLSN
NNINTMKIDWIHTYQLVEE
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6hy3 Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6hy3 The agar-specific hydrolaseZgAgaC from the marine bacteriumZobellia galactanivoransdefines a new GH16 protein subfamily.
Resolution1.3 Å
Binding residue
(original residue number in PDB)		E95 G128 D318
Binding residue
(residue number reindexed from 1)		E36 G69 D259
Annotation score4
Enzymatic activity
Enzyme Commision number 3.2.1.81: beta-agarase.
Gene Ontology
Molecular Function
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0033916 beta-agarase activity
Biological Process
GO:0005975 carbohydrate metabolic process

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Molecular Function
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Biological Process
External links
PDB RCSB:6hy3, PDBe:6hy3, PDBj:6hy3
PDBsum6hy3
PubMed30846563
UniProtD7GXG5|AGAC_ZOBGA Beta-agarase C (Gene Name=agaC)

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