Structure of PDB 6h9j Chain A Binding Site BS01

Receptor Information
>6h9j Chain A (length=338) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GSGEPREEAGALGPAWDESQLRSYSFPTRPIPRLSQSDPRAEELIENEEP
VVLTDTNLVYPALKWDLEYLQENIGNGDFSVYSASTHKFLYYDEKKMANF
QNFKPRSNREEMKFHEFVEKLQDIQQRGGEERLYLQQTLNDTVGRKIVMD
FLGFNWNWINKQQGKRGWGQLTSNLLLIGMEGNVTPAHYDEQQNFFAQIK
GYKRCILFPPDQFECLYPYPVHHPCDRQSQVDFDNPDYERFPNFQNVVGY
ETVVGPGDVLYIPMYWWHHIESLLNGGITITVNFWYKGAPTPKRIEYPLK
AHQKVAIMRNIEKMLGEALGNPQEVGPLLNTMIKGRYN
Ligand information
>6h9j Chain D (length=22) Species: 9606 (Homo sapiens) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
DIAALLIAAGADVNAHAKGAFF
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6h9j Factor Inhibiting HIF (FIH) in complex with zinc, NOG and TRPV3 (229-255)
Resolution1.83 Å
Binding residue
(original residue number in PDB)		Y102 R120 T149 L150 N151 D152 F162 T183 S184 H199 D201 E202 Q203 R238 Q239 Y276 W296 I306 L310 A317 I318 N321 M325
Binding residue
(residue number reindexed from 1)		Y91 R109 T138 L139 N140 D141 F151 T172 S173 H188 D190 E191 Q192 R227 Q228 Y265 W285 I295 L299 A306 I307 N310 M314
Enzymatic activity
Enzyme Commision number 1.14.11.30: hypoxia-inducible factor-asparagine dioxygenase.
1.14.11.n4: ankyrin-repeat-histidine dioxagenase.
Gene Ontology
Molecular Function
GO:0003714 transcription corepressor activity
GO:0005112 Notch binding
GO:0005515 protein binding
GO:0008198 ferrous iron binding
GO:0008270 zinc ion binding
GO:0019826 oxygen sensor activity
GO:0031406 carboxylic acid binding
GO:0036139 peptidyl-histidine dioxygenase activity
GO:0036140 [protein]-asparagine 3-dioxygenase activity
GO:0042803 protein homodimerization activity
GO:0046872 metal ion binding
GO:0051059 NF-kappaB binding
GO:0051213 dioxygenase activity
GO:0062101 peptidyl-aspartic acid 3-dioxygenase activity
GO:0071532 ankyrin repeat binding
Biological Process
GO:0045663 positive regulation of myoblast differentiation
GO:0045746 negative regulation of Notch signaling pathway
GO:0045892 negative regulation of DNA-templated transcription
GO:2001214 positive regulation of vasculogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005737 cytoplasm
GO:0005829 cytosol
GO:0048471 perinuclear region of cytoplasm

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Biological Process
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Cellular Component
External links
PDB RCSB:6h9j, PDBe:6h9j, PDBj:6h9j
PDBsum6h9j
PubMed
UniProtQ9NWT6|HIF1N_HUMAN Hypoxia-inducible factor 1-alpha inhibitor (Gene Name=HIF1AN)

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