Structure of PDB 6h7j Chain A Binding Site BS01
Receptor Information
>6h7j Chain A (length=290) Species:
9103
(Meleagris gallopavo) [
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AAKVMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLV
VGLLVVPFGATLVVRGTWLWGSFLCELWTSLDVLCVTASIETLCVIAIDR
YLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQA
LKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVYLRVYREAKEQIR
KIDRASKRKTSRVMAMKEHKALKTLGIIMGVFTLCWLPFFLVNIVNVFNR
DLVPDWLFVAFNWLGYANSAMNPIIYCRSPDFRKAFKRLL
Ligand information
Ligand ID
5FW
InChI
InChI=1S/C11H17NO3/c1-7(2)12-6-11(15)8-3-4-9(13)10(14)5-8/h3-5,7,11-15H,6H2,1-2H3/t11-/m0/s1
InChIKey
JWZZKOKVBUJMES-NSHDSACASA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.6.1
CC(C)NC[C@@H](c1ccc(c(c1)O)O)O
CACTVS 3.352
CC(C)NC[C@H](O)c1ccc(O)c(O)c1
CACTVS 3.352
CC(C)NC[CH](O)c1ccc(O)c(O)c1
OpenEye OEToolkits 1.6.1
CC(C)NCC(c1ccc(c(c1)O)O)O
Formula
C11 H17 N O3
Name
ISOPRENALINE
ChEMBL
CHEMBL1160723
DrugBank
ZINC
ZINC000000056652
PDB chain
6h7j Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6h7j
Molecular basis for high-affinity agonist binding in GPCRs.
Resolution
2.8 Å
Binding residue
(original residue number in PDB)
W117 D121 V122 S211 S215 F306 F307 N329 Y333
Binding residue
(residue number reindexed from 1)
W78 D82 V83 S172 S176 F239 F240 N262 Y266
Annotation score
1
Binding affinity
PDBbind-CN
: -logKd/Ki=8.62,Ki=2.4nM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004930
G protein-coupled receptor activity
GO:0004935
adrenergic receptor activity
GO:0004940
beta1-adrenergic receptor activity
Biological Process
GO:0007186
G protein-coupled receptor signaling pathway
GO:0007189
adenylate cyclase-activating G protein-coupled receptor signaling pathway
GO:0045823
positive regulation of heart contraction
Cellular Component
GO:0016020
membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6h7j
,
PDBe:6h7j
,
PDBj:6h7j
PDBsum
6h7j
PubMed
31072904
UniProt
P07700
|ADRB1_MELGA Beta-1 adrenergic receptor (Gene Name=ADRB1)
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