Structure of PDB 6gza Chain A Binding Site BS01

Receptor Information
>6gza Chain A (length=87) Species: 11786 (Murine leukemia virus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSMS
FIWQSAPDIGRKLERLEDLKSKTLGDLVREAEKIFNK
Ligand information
Ligand IDCO
InChIInChI=1S/Co/q+2
InChIKeyXLJKHNWPARRRJB-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Co+2]
CACTVS 3.341[Co++]
FormulaCo
NameCOBALT (II) ION
ChEMBL
DrugBankDB14205
ZINC
PDB chain6gza Chain A Residue 101 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB6gza Structure and architecture of immature and mature murine leukemia virus capsids.
Resolution1.89 Å
Binding residue
(original residue number in PDB)		S1 R32
Binding residue
(residue number reindexed from 1)		S1 R32
Annotation score1
Enzymatic activity
Enzyme Commision number 2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Gene Ontology
Biological Process
GO:0019068 virion assembly

View graph for
Biological Process
External links
PDB RCSB:6gza, PDBe:6gza, PDBj:6gza
PDBsum6gza
PubMed30478053
UniProtP03355|POL_MLVMS Gag-Pol polyprotein (Gene Name=gag-pol)

[Back to BioLiP]