Structure of PDB 6gw0 Chain A Binding Site BS01
Receptor Information
>6gw0 Chain A (length=305) Species:
1208060
(Norovirus Hu/GII.1/7EK/Hawaii/1971/USA) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GPGSKPFTLPILTIGELSNSRFPVPIDELYTSPNEGVIVQPQNGRSTLDG
ELLGTTQLVPSNICALRGRINAQVPDDHHQWNLQVTNTNGTPFDPTEDVP
APLGTPDFLANIYGVTSQRNPNNTCRAHDGVLATWSPKFTPKLGSVILGT
WEESDLDLNQPTRFTPVGLFNTDHFDQWALPSYSGRLTLNMNLAPSVSPL
FPGEQLLFFRSHIPLKGGTSDGAIDCLLPQEWIQHFYQESAPSPTDVALI
RYTNPDTGRVLFEAKLHRQGFITVANSGSRPIVVPPNGYFRFDSWVNQFY
SLAPM
Ligand information
Ligand ID
TUD
InChI
InChI=1S/C26H45NO6S/c1-16(4-7-23(30)27-12-13-34(31,32)33)19-5-6-20-24-21(9-11-26(19,20)3)25(2)10-8-18(28)14-17(25)15-22(24)29/h16-22,24,28-29H,4-15H2,1-3H3,(H,27,30)(H,31,32,33)/t16-,17+,18-,19-,20+,21+,22-,24+,25+,26-/m1/s1
InChIKey
BHTRKEVKTKCXOH-BJLOMENOSA-N
SMILES
Software
SMILES
CACTVS 3.341
C[C@H](CCC(=O)NCC[S](O)(=O)=O)[C@H]1CC[C@H]2[C@@H]3[C@H](O)C[C@@H]4C[C@H](O)CC[C@]4(C)[C@H]3CC[C@]12C
OpenEye OEToolkits 1.5.0
CC(CCC(=O)NCCS(=O)(=O)O)C1CCC2C1(CCC3C2C(CC4C3(CCC(C4)O)C)O)C
OpenEye OEToolkits 1.5.0
C[C@H](CCC(=O)NCCS(=O)(=O)O)[C@H]1CC[C@@H]2[C@@]1(CC[C@H]3[C@H]2[C@@H](C[C@H]4[C@@]3(CC[C@H](C4)O)C)O)C
ACDLabs 10.04
O=S(=O)(O)CCNC(=O)CCC(C4C3(C(C1C(C2(C(CC1O)CC(O)CC2)C)CC3)CC4)C)C
CACTVS 3.341
C[CH](CCC(=O)NCC[S](O)(=O)=O)[CH]1CC[CH]2[CH]3[CH](O)C[CH]4C[CH](O)CC[C]4(C)[CH]3CC[C]12C
Formula
C26 H45 N O6 S
Name
TAUROCHENODEOXYCHOLIC ACID;
2-(((3ALPHA,5BETA,7ALPHA)-3,7-DIHYDROXY-24-OXOCHOLAN-24-YL)AMINO)ETHANESULFONIC ACID;
TAUROCHENODEOXYCHOLATE
ChEMBL
CHEMBL185878
DrugBank
DB08833
ZINC
ZINC000005822376
PDB chain
6gw0 Chain A Residue 600 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6gw0
Structural Basis for Human Norovirus Capsid Binding to Bile Acids.
Resolution
1.4 Å
Binding residue
(original residue number in PDB)
Q300 S356 P357 F390
Binding residue
(residue number reindexed from 1)
Q80 S136 P137 F170
Annotation score
1
Binding affinity
MOAD
: Kd=0.000000064M
Enzymatic activity
Enzyme Commision number
?
External links
PDB
RCSB:6gw0
,
PDBe:6gw0
,
PDBj:6gw0
PDBsum
6gw0
PubMed
30355683
UniProt
J9XXB7
[
Back to BioLiP
]