Structure of PDB 6fql Chain A Binding Site BS01
Receptor Information
>6fql Chain A (length=390) Species:
7955
(Danio rerio) [
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SSGAFATASKAHGEGIKRALQGKPASFTVVGYDHDGEPRLSGGDSVSVVL
MSPDGNLSSAEVSDHQDGTYTVSYLPKGEGEHLLSVLICNQHIEGSPFKV
MVKSGRSYGGVGLPMASFGGEGDGDGQLCRPWGICVDKEGYVVVADRSNN
RVQIFKPCGTFHHKFGTLGSRPGQFDRPAGVACDSQRRIIVADKDNHRIQ
IFTFDGQFLLKFGEKGTKNGQFNYPWDVAVNFEGKILVSDTRNHRVQLFG
PDGTFLNKYGFEGALWKHFDSPRGVAFNQEGHLVVTDFNNHRLLVIRPDC
QSARFLGSEGTGNGQFLRPQGVAVDQEDRIIVADSRNHRIQVFEPNGNFL
CKFGTHGNGFGQMDRPSGIAVTPDGVIVAVDFGNNRILMF
Ligand information
>6fql Chain B (length=13) [
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ugcauuuaaugca
<<<<<...>>>>>
Receptor-Ligand Complex Structure
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PDB
6fql
Evolutionary plasticity of the NHL domain underlies distinct solutions to RNA recognition.
Resolution
2.349 Å
Binding residue
(original residue number in PDB)
C563 R564 R581 S582 R611 K628 D629 Y658 R676 R707 F722 R752 R770
Binding residue
(residue number reindexed from 1)
C129 R130 R147 S148 R177 K194 D195 Y224 R242 R273 F288 R318 R336
Enzymatic activity
Enzyme Commision number
2.3.2.27
: RING-type E3 ubiquitin transferase.
External links
PDB
RCSB:6fql
,
PDBe:6fql
,
PDBj:6fql
PDBsum
6fql
PubMed
29674686
UniProt
E7FAM5
|LIN41_DANRE E3 ubiquitin-protein ligase TRIM71 (Gene Name=trim71)
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