Structure of PDB 6f4a Chain A Binding Site BS01

Receptor Information
>6f4a Chain A (length=644) Species: 5478 (Nakaseomyces glabratus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
LSFDPAELLRTSLNVGDIVLLKQCTSELTMCVNLPQSTTDPRYTFAKKDG
TLVYAMKNSVILRIPKDPVLTRQLIVSFTLATFTKFAWTQLPIVLKKLEL
IHRYLQDSRGSKHVNFMSLVRIIKNLNIKEATINGDAYVRKVIDESMSVN
KSIDPTTLLATYWGVREQQQNNLWGSVYTNTALLSPTTVAVLPLKKAHLF
YQEVITRLESNDYQEIKAFAKLVNDKDYHSIAKRYDYIRTLLNDYAAGNI
EENAVLTTIISKIFRHIDMYRDQDVTRSLCGKLLVEISPQFILGNWDLNI
PKSGISSVEQKLYDTAMPVSDTDRYDFGDMCIDSEDAHEINDIADPAGLF
PESFDYTKSGISDDVLRVSLKRAFTTYLPDLVVPMLPKSFCNRADLGDRK
TETISGLHVDYDLGIVSNFPKVTYDKVDSIKQKKQLELLHTLATKLLHKR
IHDDNAVFNKCIPTFYDQTKSTLLVSEFMILTNKLCAAFFQENKIPGVYR
CNQAKAQFELLKEKDITKISSQLSSSFYSPFPLPHKMIGNTAYLTVTSPM
RRGPDLINHLQLHRFLKKLPLCFKQEYLDQYVWSFQARADILKIFQRHSS
TYWTLKHLEQSNGTVNCLFPYSYARGPRIGDTKVESIHPLDGIL
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6f4a Structural analysis of mtEXO mitochondrial RNA degradosome reveals tight coupling of nuclease and helicase components.
Resolution3.55 Å
Binding residue
(original residue number in PDB)		D469 E475 N477 D478 S677 M680 R701 S744 H753 M755 Y761 T765
Binding residue
(residue number reindexed from 1)		D333 E339 N341 D342 S476 M479 R500 S526 H535 M537 Y543 T547
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000175 3'-5'-RNA exonuclease activity
GO:0003723 RNA binding
GO:0004540 RNA nuclease activity
GO:0008859 exoribonuclease II activity
GO:0046872 metal ion binding
Biological Process
GO:0000957 mitochondrial RNA catabolic process
Cellular Component
GO:0005739 mitochondrion
GO:0045025 mitochondrial degradosome

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6f4a, PDBe:6f4a, PDBj:6f4a
PDBsum6f4a
PubMed29311576
UniProtQ6FJE0

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