Structure of PDB 6eth Chain A Binding Site BS01
Receptor Information
>6eth Chain A (length=422) Species:
3702
(Arabidopsis thaliana) [
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MIPTEEALRIVFGVSKRLPPVIVSLYEALGKVLAEDIRAPDPLPPYPASV
KDGYAVVASDGPGEYPVITESRAGNDGLGVTVTPGTVAYVTTGGPIPDGA
DAVVQVEDTKVIGDVSTESKRVKILIQTKKGTDIRRVGCDIEKDATVLTT
GERIGASEIGLLATAGVTMVKVYPMPIVAILSTGDELVEPTAGTLGRGQI
RDSNRAMLVAAVMQQQCKVVDLGIVRDDRKELEKVLDEAVSSGVDIILTS
GGVSMGDRDFVKPLLEEKGKVYFSKVLMKPGKPLTFAEIRAKPGKTVLAF
GLPGNPVSCLVCFNIFVVPTIRQLAGWTSPHPLRVRLRLQEPIKSDPIRP
EFHRAIIKWKDNDGSGTPGFVAESTGHQMSSRLLSMRSANALLELPATGN
VLSAGSSVSAIIVSDISAFSID
Ligand information
Ligand ID
AMP
InChI
InChI=1S/C10H14N5O7P/c11-8-5-9(13-2-12-8)15(3-14-5)10-7(17)6(16)4(22-10)1-21-23(18,19)20/h2-4,6-7,10,16-17H,1H2,(H2,11,12,13)(H2,18,19,20)/t4-,6-,7-,10-/m1/s1
InChIKey
UDMBCSSLTHHNCD-KQYNXXCUSA-N
SMILES
Software
SMILES
CACTVS 3.370
Nc1ncnc2n(cnc12)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.370
Nc1ncnc2n(cnc12)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N
ACDLabs 12.01
O=P(O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3O
OpenEye OEToolkits 1.7.6
c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)O)O)O)N
Formula
C10 H14 N5 O7 P
Name
ADENOSINE MONOPHOSPHATE
ChEMBL
CHEMBL752
DrugBank
DB00131
ZINC
ZINC000003860156
PDB chain
6eth Chain A Residue 501 [
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Receptor-Ligand Complex Structure
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PDB
6eth
The functional principle of eukaryotic molybdenum insertases.
Resolution
1.64 Å
Binding residue
(original residue number in PDB)
E201 L202 I215 S218 N219 G266 G267 S269 G324 N325
Binding residue
(residue number reindexed from 1)
E186 L187 I200 S203 N204 G251 G252 S254 G304 N305
Annotation score
5
Enzymatic activity
Enzyme Commision number
2.10.1.1
: molybdopterin molybdotransferase.
2.7.7.75
: molybdopterin adenylyltransferase.
Gene Ontology
Biological Process
GO:0006777
Mo-molybdopterin cofactor biosynthetic process
GO:0032324
molybdopterin cofactor biosynthetic process
View graph for
Biological Process
External links
PDB
RCSB:6eth
,
PDBe:6eth
,
PDBj:6eth
PDBsum
6eth
PubMed
29717023
UniProt
Q39054
|CNX1_ARATH Molybdopterin biosynthesis protein CNX1 (Gene Name=CNX1)
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