Structure of PDB 6enz Chain A Binding Site BS01

Receptor Information
>6enz Chain A (length=487) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VDGVVLNGPQTDVKAGEKFVEEACRLIMEEVVLKATDVNEKVCEWQPPEQ
LRQLLDLEMRDTGESQDKLLKLCQDVIHFSVKTNHPRFFNQLYAGLDYYS
LAARIITEALNPSIYTYEVSPVFLLVEEAVLKKMIECVGWKEGDGIFNPG
GSVSNMCAMNLARYRHCPDIKEKGLSGLPRLILFTSAECHYSMKKAASFL
GIGTQNVYFVETDGRGKMIPEDLEKQIWQARQEGAVPFLVCATSGTTVLG
AFDPLDEIAEVCERHGLWLHVDASWGGSALVSRKHRRLLHGIHRADSVAW
NPHKMLMAGIQCSALLVKDKSDLLKKCYSAKATDKFYDVSYDTGDKSIQC
SRRPDAFKFWMTWKALGTSGLEERVNRAFALSRYLVDEIKKREGFKLLME
PEYTNVCFWYIPPSLREMEEGPEFWRKLSLVAPAIKEKMMKKGSLMLGYQ
PHRGKVNFFRQVVISPQVSREDMDFLLDEIDSLGRDM
Ligand information
Ligand IDPLP
InChIInChI=1S/C8H10NO6P/c1-5-8(11)7(3-10)6(2-9-5)4-15-16(12,13)14/h2-3,11H,4H2,1H3,(H2,12,13,14)
InChIKeyNGVDGCNFYWLIFO-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341Cc1ncc(CO[P](O)(O)=O)c(C=O)c1O
OpenEye OEToolkits 1.5.0Cc1c(c(c(cn1)COP(=O)(O)O)C=O)O
ACDLabs 10.04O=P(O)(O)OCc1cnc(c(O)c1C=O)C
FormulaC8 H10 N O6 P
NamePYRIDOXAL-5'-PHOSPHATE;
VITAMIN B6 Phosphate
ChEMBLCHEMBL82202
DrugBankDB00114
ZINCZINC000001532514
PDB chain6enz Chain A Residue 601 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6enz Structure of the mouse acidic amino acid decarboxylase GADL1.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		G160 G161 S162 H200 T257 D282 S284 K314
Binding residue
(residue number reindexed from 1)		G150 G151 S152 H190 T247 D272 S274 K304
Annotation score1
Enzymatic activity
Enzyme Commision number 4.1.1.11: aspartate 1-decarboxylase.
4.1.1.29: sulfinoalanine decarboxylase.
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0004068 aspartate 1-decarboxylase activity
GO:0004782 sulfinoalanine decarboxylase activity
GO:0016830 carbon-carbon lyase activity
GO:0016831 carboxy-lyase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0008150 biological_process
GO:0019752 carboxylic acid metabolic process

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:6enz, PDBe:6enz, PDBj:6enz
PDBsum6enz
PubMed29372909
UniProtQ80WP8|GADL1_MOUSE Acidic amino acid decarboxylase GADL1 (Gene Name=Gadl1)

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