Structure of PDB 6efa Chain A Binding Site BS01

Receptor Information
>6efa Chain A (length=202) Species: 1302 (Streptococcus gordonii) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DTERPVVNVPSEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYSNQPG
RGTEWLQYSVTQVGNQLKVRIFGNVPIDTTIGDYTRYVVATDAAGNVNAT
QTEMGNAAVDKTSVNGQFKLIIRFRIKTPENTVFVNNPNQLTEVEKNLVR
EAVKKSNPDLRAQDVLNSNYVTGITVSNNGTTTITYRDGRKDIIDGSKFI
DT
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain6efa Chain A Residue 700 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6efa Origins of glycan selectivity in streptococcal Siglec-like adhesins suggest mechanisms of receptor adaptation.
Resolution1.6 Å
Binding residue
(original residue number in PDB)		D399 E401 D427 N428 D490
Binding residue
(residue number reindexed from 1)		D1 E3 D29 N30 D92
Annotation score4
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:6efa, PDBe:6efa, PDBj:6efa
PDBsum6efa
PubMed35585145
UniProtQ939N5|GSPB_STRGN Platelet binding protein GspB (Gene Name=gspB)

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