Structure of PDB 6edv Chain A Binding Site BS01
Receptor Information
>6edv Chain A (length=184) Species:
208964
(Pseudomonas aeruginosa PAO1) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
AISELHGPRLLLRAWRDSDREAFAEMCADPQVMEFFPSVLDRAQSDALVD
RVQAHFAERGYGPWALELPGEAAFIGFTGLFDVTMDVHFAPTVEIGWRLA
PAYWGRGLAREAAETALDFAFERLRLPEVVAFTTPPNRRSWGLMERLGMR
RDPAEDFDHPLLAADHPMRRHILYRVDAARWAER
Ligand information
Ligand ID
COA
InChI
InChI=1S/C21H36N7O16P3S/c1-21(2,16(31)19(32)24-4-3-12(29)23-5-6-48)8-41-47(38,39)44-46(36,37)40-7-11-15(43-45(33,34)35)14(30)20(42-11)28-10-27-13-17(22)25-9-26-18(13)28/h9-11,14-16,20,30-31,48H,3-8H2,1-2H3,(H,23,29)(H,24,32)(H,36,37)(H,38,39)(H2,22,25,26)(H2,33,34,35)/t11-,14-,15-,16+,20-/m1/s1
InChIKey
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
CC(C)(COP(=O)(O)OP(=O)(O)OCC1C(C(C(O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)C(C(=O)NCCC(=O)NCCS)O
CACTVS 3.341
CC(C)(CO[P@@](O)(=O)O[P@](O)(=O)OC[C@H]1O[C@H]([C@H](O)[C@@H]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[C@@H](O)C(=O)NCCC(=O)NCCS
OpenEye OEToolkits 1.5.0
CC(C)(CO[P@](=O)(O)O[P@@](=O)(O)OC[C@@H]1[C@H]([C@H]([C@@H](O1)n2cnc3c2ncnc3N)O)OP(=O)(O)O)[C@H](C(=O)NCCC(=O)NCCS)O
CACTVS 3.341
CC(C)(CO[P](O)(=O)O[P](O)(=O)OC[CH]1O[CH]([CH](O)[CH]1O[P](O)(O)=O)n2cnc3c(N)ncnc23)[CH](O)C(=O)NCCC(=O)NCCS
ACDLabs 10.04
O=C(NCCS)CCNC(=O)C(O)C(C)(C)COP(=O)(O)OP(=O)(O)OCC3OC(n2cnc1c(ncnc12)N)C(O)C3OP(=O)(O)O
Formula
C21 H36 N7 O16 P3 S
Name
COENZYME A
ChEMBL
CHEMBL1213327
DrugBank
DB01992
ZINC
ZINC000008551087
PDB chain
6edv Chain A Residue 204 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6edv
A Gcn5-Related N-Acetyltransferase (GNAT) Capable of Acetylating Polymyxin B and Colistin Antibiotics in Vitro.
Resolution
1.35 Å
Binding residue
(original residue number in PDB)
V40 W105 W112 G113 R114 G115 A117 R118 T141 S148
Binding residue
(residue number reindexed from 1)
V32 W97 W104 G105 R106 G107 A109 R110 T133 S140
Annotation score
4
Enzymatic activity
Enzyme Commision number
2.3.1.-
Gene Ontology
Molecular Function
GO:0016746
acyltransferase activity
GO:0016747
acyltransferase activity, transferring groups other than amino-acyl groups
View graph for
Molecular Function
External links
PDB
RCSB:6edv
,
PDBe:6edv
,
PDBj:6edv
PDBsum
6edv
PubMed
30499668
UniProt
Q9HX72
|ATSE3_PSEAE Acetyltransferase PA3944 (Gene Name=PA3944)
[
Back to BioLiP
]