Structure of PDB 6e1c Chain A Binding Site BS01
Receptor Information
>6e1c Chain A (length=350) Species:
595536
(Methylosinus trichosporium OB3b) [
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AWNWDLPKYIPPPRVPVDNPMSEEKFQLGRRLFYDKRLSGNGTLSCSSCH
LQERAFTDGRTVSIGSTGAKTPRNAPSIAYSGWHGTLTWANPALVTLERQ
MLNPLFGADPIEMGASDANKAEIVARFRADADYRRWFAAAFPEMSEPISF
ATIIAAISAFQRGVYSFDSRYDHYLQGEAQLTEAEQRGHDLYFGEKAECH
HCHGSVGLDDQFVHARTREPELPFHNTGLYDIDGKGAYPAPNHGLFDITG
DPDDMGKFRAPSLRNIALTAPYMHDGSVATLEEVIDIYSEGGRKIASGPH
AGDGRASALKSGLIVKIDLTAQEKADLLAFLKTLTDESLIASPRFSDPWR
Ligand information
Ligand ID
HEC
InChI
InChI=1S/C34H34N4O4.Fe/c1-7-21-17(3)25-13-26-19(5)23(9-11-33(39)40)31(37-26)16-32-24(10-12-34(41)42)20(6)28(38-32)15-30-22(8-2)18(4)27(36-30)14-29(21)35-25;/h7-8,13-16H,9-12H2,1-6H3,(H,39,40)(H,41,42);/q-4;+4/b21-7?,22-8?,26-13-,29-14-,30-15-,31-16-;
InChIKey
HXQIYSLZKNYNMH-LJNAALQVSA-N
SMILES
Software
SMILES
ACDLabs 10.04
O=C(O)CCC1=C(C2=CC6=C(C(=C/C)\C5=CC4=C(C(\C3=Cc7c(c(c8C=C1N2[Fe](N34)(N56)n78)CCC(=O)O)C)=C/C)C)C)C
OpenEye OEToolkits 1.5.0
CC=C1C(=C2C=C3C(=CC)C(=C4N3[Fe]56N2C1=Cc7n5c(c(c7C)CCC(=O)O)C=C8N6C(=C4)C(=C8CCC(=O)O)C)C)C
CACTVS 3.341
C\C=C1/C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)\C7=C/C)C=C1N2[Fe@@]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
CACTVS 3.341
CC=C1C(=C2C=C3N4C(=Cc5n6c(C=C7N8C(=C(C)C7=CC)C=C1N2[Fe]468)c(C)c5CCC(O)=O)C(=C3C)CCC(O)=O)C
Formula
C34 H34 Fe N4 O4
Name
HEME C
ChEMBL
DrugBank
ZINC
PDB chain
6e1c Chain A Residue 401 [
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Receptor-Ligand Complex Structure
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PDB
6e1c
MbnH is a diheme MauG-like protein associated with microbial copper homeostasis.
Resolution
2.617 Å
Binding residue
(original residue number in PDB)
W113 A221 C223 C226 H227 H249 T251 L253 F282 A284 P285 L287 I290 Y296 M297 H298 V308 Y312 I338 L351
Binding residue
(residue number reindexed from 1)
W89 A197 C199 C202 H203 H225 T227 L229 F258 A260 P261 L263 I266 Y272 M273 H274 V284 Y288 I314 L327
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0020037
heme binding
View graph for
Molecular Function
External links
PDB
RCSB:6e1c
,
PDBe:6e1c
,
PDBj:6e1c
PDBsum
6e1c
PubMed
31511324
UniProt
A0A2D2CY72
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