Structure of PDB 6bd2 Chain A Binding Site BS01

Receptor Information

>6bd2 Chain A (length=229) Species: 9606 (Homo sapiens)

EKTELIQKAKLAEQAERYDDMATCMKAVTEQGAELSNEERNLLSVAYKNV
VGGRRSAWRVISSIEQKTDTSDKKLQLIKDYREKVESELRSICTTVLELL
DKYLIANATNPESKVFYLKMKGDYFRYLAEVACGDDRKQTIDNSQGAYQE
AFDISKKEMQPTHPIRLGLALNFSVFYYEILNNPELACTLAKTAFDEAIA
ELDTLNEDSYKDSTLIMQLLRDNLTLWTS

Ligand information

>6bd2 Chain C (length=17) Species: 9606 (Homo sapiens)

SYSNTLPVRPRSSSMAA

Receptor-Ligand Complex Structure

Structure summary

• PDB: 6bd2 Mechanism of IRSp53 inhibition by 14-3-3.
• Resolution: 2.9 Å
• Binding residue (original residue number in PDB): K49 N50 G53 R56 R60 R127 L172 N173 V176 I217 N224 W228
• Binding residue (residue number reindexed from 1): K48 N49 G52 R55 R59 R126 L171 N172 V175 I216 N223 W227

Gene Ontology

Molecular Function

• GO:0005515 protein binding
• GO:0019904 protein domain specific binding
• GO:0042802 identical protein binding
• GO:0044325 transmembrane transporter binding
• GO:0071889 14-3-3 protein binding

Biological Process

• GO:0006605 protein targeting
• GO:0007165 signal transduction
• GO:0007264 small GTPase-mediated signal transduction
• GO:0008104 protein localization
• GO:0021762 substantia nigra development
• GO:0034766 negative regulation of monoatomic ion transmembrane transport
• GO:0045892 negative regulation of DNA-templated transcription

Cellular Component

• GO:0005634 nucleus
• GO:0005737 cytoplasm
• GO:0005829 cytosol
• GO:0005925 focal adhesion
• GO:0016020 membrane
• GO:0032991 protein-containing complex
• GO:0045202 synapse
• GO:0070062 extracellular exosome

External links

• PDB: RCSB:6bd2, PDBe:6bd2, PDBj:6bd2
• PDBsum: 6bd2
• PubMed: 30696821
• UniProt: P27348|1433T_HUMAN 14-3-3 protein theta (Gene Name=YWHAQ)