Structure of PDB 6bcf Chain A Binding Site BS01
Receptor Information
>6bcf Chain A (length=288) Species:
330483
(Leptographium truncatum) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
NISPWTITGFADAESSFMLTVSKDSKRNTGWSVRPRFRIGLHNKDVTILK
SIREYLGAGIITSDIDARIRFESLKELEVVINHFDKYPLITQKRADYLLF
KKAFYLIKNKEHLTEEGLNQILTLKASLNLGLSEELKEAFPNTIPAERLL
VTGQEIPDSNWVAGFTAAEGSFYIRIAKNSTLKTGYQVQSVFQITQDTRD
IELMKNLISYLNCGNIRIRTCVDLVVTNLNDIKEKIIPFFNKNHIIGVKL
QDYRDWCKVVTLIDNKEHLTSEGLEKIQKIKEGMNRGR
Ligand information
>6bcf Chain B (length=26) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggtctaaacgtcgtataggagcattt
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
6bcf
Active site residue identity regulates cleavage preference of LAGLIDADG homing endonucleases.
Resolution
2.92 Å
Binding residue
(original residue number in PDB)
E29 M33 R51 R53 H57 R83 N144 L145 R190 T196 L197 K198 Q202 Q204 R232 T252 L254 L294
Binding residue
(residue number reindexed from 1)
E14 M18 R36 R38 H42 R68 N129 L130 R175 T181 L182 K183 Q187 Q189 R217 T227 L229 L269
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0004519
endonuclease activity
View graph for
Molecular Function
External links
PDB
RCSB:6bcf
,
PDBe:6bcf
,
PDBj:6bcf
PDBsum
6bcf
PubMed
30357419
UniProt
C7SWF3
[
Back to BioLiP
]