Structure of PDB 6bab Chain A Binding Site BS01

Receptor Information
>6bab Chain A (length=290) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
TDEYQLFEELGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLER
EARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVAREYYSE
ADASHCIQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGL
AIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVG
YPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKR
ITASEALKHPWICQRSTVASMMHRQETVDCLKKFNARRKL
Ligand information
Ligand IDD0S
InChIInChI=1S/C26H31N7O2S/c1-4-31(5-2)17(3)13-27-26(35)18-11-22(29-24(12-18)32-15-19(34)16-32)20-14-28-33-9-8-21(30-25(20)33)23-7-6-10-36-23/h6-12,14,17,19,34H,4-5,13,15-16H2,1-3H3,(H,27,35)/t17-/m0/s1
InChIKeyOFBABNCAYHDFSH-KRWDZBQOSA-N
SMILES
SoftwareSMILES
ACDLabs 12.01c5(c4ccn3c(c(c2nc(N1CC(O)C1)cc(C(NCC(C)N(CC)CC)=O)c2)cn3)n4)cccs5
CACTVS 3.385CCN(CC)[C@@H](C)CNC(=O)c1cc(nc(c1)c2cnn3ccc(nc23)c4sccc4)N5CC(O)C5
OpenEye OEToolkits 2.0.6CCN(CC)C(C)CNC(=O)c1cc(nc(c1)N2CC(C2)O)c3cnn4c3nc(cc4)c5cccs5
CACTVS 3.385CCN(CC)[CH](C)CNC(=O)c1cc(nc(c1)c2cnn3ccc(nc23)c4sccc4)N5CC(O)C5
OpenEye OEToolkits 2.0.6CCN(CC)[C@@H](C)CNC(=O)c1cc(nc(c1)N2CC(C2)O)c3cnn4c3nc(cc4)c5cccs5
FormulaC26 H31 N7 O2 S
NameN-[(2S)-2-(diethylamino)propyl]-2-(3-hydroxyazetidin-1-yl)-6-[5-(thiophen-2-yl)pyrazolo[1,5-a]pyrimidin-3-yl]pyridine-4-carboxamide
ChEMBLCHEMBL4210359
DrugBank
ZINC
PDB chain6bab Chain A Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6bab TBD
Resolution1.91 Å
Binding residue
(original residue number in PDB)
L21 G22 K23 V29 A42 F91 V94 E98 E141 L144 D158
Binding residue
(residue number reindexed from 1)
L10 G11 K12 V18 A31 F80 V83 E87 E130 L133 D147
Annotation score1
Enzymatic activity
Catalytic site (original residue number in PDB) D137 K139 E141 N142 D158 T178
Catalytic site (residue number reindexed from 1) D126 K128 E130 N131 D147 T167
Enzyme Commision number 2.7.11.17: calcium/calmodulin-dependent protein kinase.
Gene Ontology
Molecular Function
GO:0004672 protein kinase activity
GO:0005524 ATP binding
Biological Process
GO:0006468 protein phosphorylation

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Molecular Function

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Biological Process
External links
PDB RCSB:6bab, PDBe:6bab, PDBj:6bab
PDBsum6bab
PubMed
UniProtQ6PHZ2|KCC2D_MOUSE Calcium/calmodulin-dependent protein kinase type II subunit delta (Gene Name=Camk2d)

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