Structure of PDB 6b0x Chain A Binding Site BS01

Receptor Information
>6b0x Chain A (length=284) Species: 53369 (Dubowvirus dv80alpha) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDNVMMHEKKDGTLMNEFTTPILQEVMENSKIMQLGKYEPMEGTEKKFTF
WADKPGAYWVGEGQKIETSKATWVNATMRAFKLGVILPVTKEFLNYTYSQ
FFEEMKPMIAEAFYKKFDEAGILNQGNNPFGKSIAQSIEKTNKVIKGDFT
QDNIIDLEALLEDDELEANAFISKTQNRSLLRKIVDPETKERIYDRNSDS
LDGLPVVNLKSSNLKRGELITGDFDKLIYGIPQLIEYKIDETAQLSTVKN
EDGTPVNLFEQDMVALRATMHVALHIADDKAFAK
Ligand information
>6b0x Chain a (length=14) Species: 53369 (Dubowvirus dv80alpha) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
NLAEIARQKRIIKN
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6b0x Competing scaffolding proteins determine capsid size during mobilization ofStaphylococcus aureuspathogenicity islands.
Resolution3.8 Å
Binding residue
(original residue number in PDB)		Q49 E53 M58 Q59 L60 G61 K62 Y63 N194 P230 I253
Binding residue
(residue number reindexed from 1)		Q24 E28 M33 Q34 L35 G36 K37 Y38 N169 P205 I228
Enzymatic activity
Enzyme Commision number ?
Gene Ontology

View graph for
Cellular Component
External links
PDB RCSB:6b0x, PDBe:6b0x, PDBj:6b0x
PDBsum6b0x
PubMed28984245
UniProtA4ZFB3|CAPSD_BP80A Major capsid protein (Gene Name=gp47)

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