Structure of PDB 6akv Chain A Binding Site BS01

Receptor Information
>6akv Chain A (length=151) Species: 1141133 (Bacillus phage B4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
AMALQTLIDKANRKLNVSGMRKDVADRTRAVITQMHAQGIYICVAQGFRS
FAEQNALYAQGRTKPGSIVTNARGGQSNHNYGVAVDLCLYTQDGSDVIWT
VEGNFRKVIAAMKAQGFKWGGDWVSFKDYPHFELYDVVGGQKPPADNGGA
V
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain6akv Chain A Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6akv Crystal Structure of LysB4, an Endolysin fromBacillus cereus-Targeting Bacteriophage B4.
Resolution2.4 Å
Binding residue
(original residue number in PDB)		H80 D87 H132
Binding residue
(residue number reindexed from 1)		H79 D86 H131
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008233 peptidase activity
GO:0046872 metal ion binding
GO:0061786 peptidoglycan stem peptide endopeptidase activity

View graph for
Molecular Function
External links
PDB RCSB:6akv, PDBe:6akv, PDBj:6akv
PDBsum6akv
PubMed30518175
UniProtH9NAL3

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